Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vimu5g00159 | ATGATAGTGTTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTGATTGTATAATAATTTTAAATGAATCACATAATGACACGGACATTTTTTGGGAAAACCATGTGGTTTATGATGAGTGGTGGACGGTGTTTTCAGGGCATGGAGTGGATGAGAAATCATTGGTAACATTACTGGGAAAATGGGATCCTCTGGAGAGAGAATCTTTCAGGAAGAAGACACCACATTTATTCACTGAGGATCATGAACGCCATTTTCAGAGGTGGGATGATCACTATGTTCATCTTCTCAAGCATGAATTCGTGCGTTTTAAGAATGCTGTGGTGTTGTGGTCCATGCACCCTTGGGAAAGAGATGCCCGTTTAGTAAGAGAGGCCCTAAAGAAGGGCCAAAATGCATATGGAGTTTTGGTTGAGGTTGCATGCACTAGATCCTCAGAAGAGCTATTAGGAGCTAGGAAGGCCTATCACTCCCTCTTTGACCACTCCATTGAAGAAGATGTTGCCTCTCACATCCATTCCATTGAAAGAAAGCTATTGATTGCTCTACTAAGTGCCTATAGATATGAAGGATCCAAGGTTAAAGATGACACTGCAAAATCAGAGGCCAAAGTCCTCTCTAATGCAATCAAGAATGCTCATAAGAAACCTATTAATGAGGATGATGAAGTGATAAGGATATTGTCAACAAGAAGCAAGCTGCATCTTCAGGCAGTTTACAAGCACTACAATGAGATTTCTGGCAAAAACCTTGATGAGGATCTTGACGACTTAAGATTTAAAGAGACTGTGCAATGCCTTTGTATCCCACAAATATACTTCAGCAAGGTTTTGAATGCAGCATTGAGAATTGATGTGGATAAGAATACTAAGAAATCTCTTACTCGTGTGATTGTTACAAGAGCTGAAATTGATATGAAGGAAATAAAAGCAGAATACCATAACCTATATGGAGTTTCTTTGCCCCAGAAAGTTGAAGAGGTTGCTAGAGGAAACTACAAGGATTTCTTGCTAAATTTGATCGTCAGAGGAGGCTGA | 1098 | 0.3643 | MIVFIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIDCIIILNESHNDTDIFWENHVVYDEWWTVFSGHGVDEKSLVTLLGKWDPLERESFRKKTPHLFTEDHERHFQRWDDHYVHLLKHEFVRFKNAVVLWSMHPWERDARLVREALKKGQNAYGVLVEVACTRSSEELLGARKAYHSLFDHSIEEDVASHIHSIERKLLIALLSAYRYEGSKVKDDTAKSEAKVLSNAIKNAHKKPINEDDEVIRILSTRSKLHLQAVYKHYNEISGKNLDEDLDDLRFKETVQCLCIPQIYFSKVLNAALRIDVDKNTKKSLTRVIVTRAEIDMKEIKAEYHNLYGVSLPQKVEEVARGNYKDFLLNLIVRGG | 365 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vimu5g00159 | 365 | Gene3D | Annexin | 293 | 362 | IPR037104 | GO:0005509|GO:0005544 | |
| Vimu5g00159 | 365 | SUPERFAMILY | Annexin | 63 | 361 | IPR037104 | GO:0005509|GO:0005544 | |
| Vimu5g00159 | 365 | Pfam | Annexin | 229 | 276 | IPR018502 | GO:0005509|GO:0005544 | |
| Vimu5g00159 | 365 | Pfam | Annexin | 138 | 203 | IPR018502 | GO:0005509|GO:0005544 | |
| Vimu5g00159 | 365 | Pfam | Annexin | 311 | 360 | IPR018502 | GO:0005509|GO:0005544 | |
| Vimu5g00159 | 365 | FunFam | annexin D4 | 292 | 362 | - | - | |
| Vimu5g00159 | 365 | FunFam | annexin D4 | 204 | 291 | - | - | |
| Vimu5g00159 | 365 | PRINTS | Annexin family signature | 229 | 255 | IPR001464 | GO:0005509|GO:0005544 | |
| Vimu5g00159 | 365 | PRINTS | Annexin family signature | 332 | 347 | IPR001464 | GO:0005509|GO:0005544 | |
| Vimu5g00159 | 365 | PRINTS | Annexin family signature | 66 | 88 | IPR001464 | GO:0005509|GO:0005544 | |
| Vimu5g00159 | 365 | PRINTS | Annexin family signature | 304 | 324 | IPR001464 | GO:0005509|GO:0005544 | |
| Vimu5g00159 | 365 | Gene3D | Annexin | 204 | 292 | IPR037104 | GO:0005509|GO:0005544 | |
| Vimu5g00159 | 365 | ProSiteProfiles | Annexin repeat profile. | 134 | 205 | IPR018502 | GO:0005509|GO:0005544 | |
| Vimu5g00159 | 365 | PANTHER | ANNEXIN | 63 | 360 | - | - | |
| Vimu5g00159 | 365 | SMART | annex3 | 305 | 360 | IPR018502 | GO:0005509|GO:0005544 | |
| Vimu5g00159 | 365 | SMART | annex3 | 150 | 203 | IPR018502 | GO:0005509|GO:0005544 | |
| Vimu5g00159 | 365 | SMART | annex3 | 240 | 287 | IPR018502 | GO:0005509|GO:0005544 | |
| Vimu5g00159 | 365 | Gene3D | Annexin | 134 | 203 | IPR037104 | GO:0005509|GO:0005544 | |
| Vimu5g00159 | 365 | FunFam | Annexin | 134 | 203 | - | - | |
| Vimu5g00159 | 365 | ProSiteProfiles | Annexin repeat profile. | 217 | 303 | IPR018502 | GO:0005509|GO:0005544 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vimu5g00159 | Vimu-Chr5 | 1322686 | 1327837 | Tandem |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Vimu5g00159 | 5 | 1322686 | 1327837 | Vimu5g00159 | 5 | 1322686 | 1327837 | ECH |