Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00136 TCACTTCCAATGGCCTCTCCTCCTTTTTCTTCCGCCGTTGTAAAGGATGCAAAAGTGCTTATGGTTGGTGCTGGTGGAATTGGCTGCGAGCTTCTCAAGACTCTCGCGCTCTCCGGCTTCCCTGACATTCATATCGGCTTTTGTGCTGTTGGGGTTTGGTTAAAGTTTCGAGTTTCGTGCGTTTCGGTGGTGCTTAAAATCGCTTTGTTAGTTTTCGGTTTTGGGAGGGTTGTTGGTAGTTTGATTCCTTGCTCCTTTCGTGTAGTTGGTGGCTTTTTGCTTCTCGTTATGAATTTCAATGTTTTGTTGAAGGAGGAAGAGTTTTTGAGTGTTGGGACCAGGTGTCTTATTGTCAGCAATCAGTCAACCCATGAATTCTTGCCTTATGTACTAGGAATTGACATGGACACAATAGAAGTCAGTAACCTGAATAGACAATTTTTATTTCGAAAATCTCATGTCGGGCAATCTAAAGCTAAAGTTGCTAGGGATGCTGTGTTAAAATTTAGGCCCCACATAAACATTACTCCATACCATGCAAATGTCAAAGATCCTGAATTCAATGTGGACTTCTTTAAGCAATTTAACGTTGTTCTAAATGGACTTGACAATCTAGATGCACGCCGGCATGTGAATCGCTTGTGCCTGGCAGCTAATGTTCCATTGGTTGAAAGTGGAACTACTGGGTTCCTTGGACAGGTAACTATACATGTCAAGGGAAGAACAGAGTGCTATGAGTGTCAGCCTAAACCAGCACCCAAGACATATCCTGTCTGTACTATCACAAGTACCCCATCAAAGTTTGTTCACTGTGTTGTGTGGGCAAAGGACCTACTTTTTGCCAAGTTATTTGGGGATAAGAATCAGGGAAATGACTTGAATGTTCGATCAAGTGATGGTGCTAGCTCTTCAGAAAATGTAGAGGATGTATTTGAACGTAGGAAAGATGAAGACATTGATCAATATGGAAGGAAAATTTTCGACCACGTATTTGGGTATAACATTGAATTAGCCTTGTCTAATGATGAGACATGGAAAAATCGTAATAGACCAAAGCCTATATACAGCAAGGATGTTCTGTCTGATGAACTGGCTCAACAAAATGGAAATTTGGAGAAAAATAATGCGTGTGATGATGAATTATCAGTATCTGCCATGACATCTTTGGGTATGAAGAATCCACAGGATATTTGGAGTCTCAAAGAAAACTCGAAAATATTTCTTGAAGCATTGCGACTATTTTTTACAAAAAGGGAAAAGGAGATTGGCAATCTAGGATTTGATAAAGATGATCAGTTGGCTGTTGAATTTGTTACTGCAGCTGCAAACATACGGGCTGCTTCCTTTGGCATCCCTCTGCACAGCCTTTTTGAAGCTAAAGGTATTGCTGGTAATATTGTGCATGCTGTTGCGACTACAAATGCTGTTATTGCTGGGTTGATTGTCATTGAAGCAATCAAGGTGCTGCAAAATGACATTGAAAGTTGTAGTGCAATGGATAATCATGTTGCTGGTGCTAGAATGACATATTGTCTGGAACATCCATCAAGAAACATGCTGCTTATGCCAGTGGAGCCATTTGAACCTAACAAGTCTTGTTATGTTTGTTCTGAGACACCTTTATCCCTTGAAATTAACACCAACCGTTCAAAGTTGAAAGACTTTGTCGAAAAAATTGTGAAGGCAAAACTAGGGATGAACCTTCCTCTTATTATGTGTGCTTCAAATCTCCTTTATGAAGCTGGTGATGTTGAGGACGACATGATTGCCATTTATGAGTCCAACCTTGAAAAGGTCCTGGCTGAGCTTCCTTCTCCAGTAACTGGTGGAACAATGCTTACGGTGGAGGATATGCAACAGGAATTTGTTTGCAGTATTAACATCAAACACAGAGAGGAGTTTGATGAAGAAAAAGAACCTGATGGGATGGTTCTCTCAGGATGGACTCAACCAGTGTCAGCAACAGAAAATAAAGACAAATCTGTTGGCAATGGTGCAAGCACCTCAGATGCAGTAGTAACAGCTGTGCATTCTGAAAAGGATGAAGAAATAACTATTGTTTCAACCTTGAAGAAGCGAAAGCTTCCAGATGAGACTGACATTTCAAGTGCCACTGCGGAAGTAAAACATCAAAAGCAGTTGGAAGTAATTGATGACGAAGACGATCTTGTCATGCTTGATGGTGATTTAGACAGCTTTAAAAAGAGAAGATTCTCATAG 2220 0.4068 SLPMASPPFSSAVVKDAKVLMVGAGGIGCELLKTLALSGFPDIHIGFCAVGVWLKFRVSCVSVVLKIALLVFGFGRVVGSLIPCSFRVVGGFLLLVMNFNVLLKEEEFLSVGTRCLIVSNQSTHEFLPYVLGIDMDTIEVSNLNRQFLFRKSHVGQSKAKVARDAVLKFRPHINITPYHANVKDPEFNVDFFKQFNVVLNGLDNLDARRHVNRLCLAANVPLVESGTTGFLGQVTIHVKGRTECYECQPKPAPKTYPVCTITSTPSKFVHCVVWAKDLLFAKLFGDKNQGNDLNVRSSDGASSSENVEDVFERRKDEDIDQYGRKIFDHVFGYNIELALSNDETWKNRNRPKPIYSKDVLSDELAQQNGNLEKNNACDDELSVSAMTSLGMKNPQDIWSLKENSKIFLEALRLFFTKREKEIGNLGFDKDDQLAVEFVTAAANIRAASFGIPLHSLFEAKGIAGNIVHAVATTNAVIAGLIVIEAIKVLQNDIESCSAMDNHVAGARMTYCLEHPSRNMLLMPVEPFEPNKSCYVCSETPLSLEINTNRSKLKDFVEKIVKAKLGMNLPLIMCASNLLYEAGDVEDDMIAIYESNLEKVLAELPSPVTGGTMLTVEDMQQEFVCSINIKHREEFDEEKEPDGMVLSGWTQPVSATENKDKSVGNGASTSDAVVTAVHSEKDEEITIVSTLKKRKLPDETDISSATAEVKHQKQLEVIDDEDDLVMLDGDLDSFKKRRFS 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00136 739 Gene3D - 537 727 - -
Vimu5g00136 739 Pfam ThiF family 14 45 IPR000594 -
Vimu5g00136 739 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 133 583 IPR035985 GO:0008641
Vimu5g00136 739 Gene3D - 10 46 - -
Vimu5g00136 739 FunFam SUMO-activating enzyme subunit 468 499 - -
Vimu5g00136 739 Pfam Ubiquitin-activating enzyme, SCCH domain 401 460 IPR019572 -
Vimu5g00136 739 Gene3D Ubiquitin activating enzymes (Uba3). Chain: B, domain 2 254 465 IPR023318 -
Vimu5g00136 739 FunFam SUMO-activating enzyme subunit 2 110 199 - -
Vimu5g00136 739 Gene3D - 112 199 IPR042449 -
Vimu5g00136 739 Pfam Ubiquitin/SUMO-activating enzyme ubiquitin-like domain 543 634 IPR028077 -
Vimu5g00136 739 PIRSF SUMO_E1B 10 45 IPR030661 GO:0016925|GO:0019948
Vimu5g00136 739 PIRSF SUMO_E1B 130 722 IPR030661 GO:0016925|GO:0019948
Vimu5g00136 739 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 15 587 IPR045886 -
Vimu5g00136 739 Pfam ThiF family 133 500 IPR000594 -
Vimu5g00136 739 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 15 45 IPR035985 GO:0008641
Vimu5g00136 739 FunFam SUMO-activating enzyme subunit 537 682 - -
Vimu5g00136 739 FunFam SUMO-activating enzyme subunit 254 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00136 Vimu-Chr5 1102033 1109155 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g00136 5 1102033 1109155 Vimu5g00136 5 1102033 1109155 ECH