Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00132 ATGGCGGAACAAGGCAGCGCCGCCGTCAACGACGGCGAAACAGAACCGCAACAAAACAAACACCACGTCCTCAACAACCACAACGATAACAACGACGTAGACAACAACGACGACAGTTCAGATCCAGAGTTGTTCTGCTGTTTGCTTCAGCCAGCCACCGCCGACAGAGATCCCGAGTACATCGGCATTCGCCGCCTCCTCCTTCTTCGGAAGGCGGAGGCCGGAATTATTCAGCGCAGAGATTGGAGATGCAATGGAAAAACTTATGTGGCATATCGGAATTACATAAGTAGGCCTAGAAACTGGGAAAGGGATAGTTCACGAGCCCCTAGTCTGCACAGTACTCCAGGAAACAGTGGCCGATTTTTTCCATCTCCAAGTCCACACTCCCGTTGGTCTGAGGTGGACAGCTTGAGTTCTGGGAGGGATCTGCAAAATGCAAATCCAGCGGTACATAATCATAGATCGAGTTTTGGGTCAAGTGTAAGTGATTCTGATCATCCTAGACACCGTAGGACTGAGTCCGCTTATTCTTTTGTTGGAATGCATTGTATCTTTGACAAGTGCAAAGCCTCTGTTTCGGTGTTGAAGTTTGGGCACAAGAGTTCTGATTTACTTGCTTATGGGGCAGCTGATGGAACCTTGACTGTCTGCAATGTATCAGAGAATCCGTCAGTCATAAAACAATTAGAAGGGCATTCCAACGATGTAACAGATTTTGATTTTACATCAAATAATCAATACATTGCTTCGTCTTCATGGGATAAAACTGTGAGAGTATGGGAGATAGCGAAAGGTATTTGCATACGGGTGATATATGGAGTATGTCCACAATTGTGTATTCGTTTTCACCCTGTAAGTATAATTGGATTTCCTTCTTCCTCTCATCTACTGAAAATAAATATTCTTTGCAACTTGTCCAATTTTTCCAAAGATACGGTAAATAATAACCTCCTTTCAGTTGGAAATGCAAACAAAGAAATCAATGTGTTCAATTTTAGTACTGGAAGGGTAATTAATAAATCACTATTTGACAGTGGAGTTACCTCTTTGGACCATGACCATACAGGACTTCTCTTATTTTGTGGAGATGCACAGGGATGTATATACTCAGTAAATATGAACTCTCACACAGGTGTATTATCTCGCTCCCATCGTTATAGAAGTAGTAGCAAGCCCAAATCTCCTGTTACCACAGTGCAGTATAGGAGTTTCTCTCTACTTGCACGCGGACCTGTGTTGTTGACATGTAACCAGGATGGAAACCTGTCTTTCTTCAGTGTGGCTTCTGAGATAAATGGCTATTTAACTCTTCGATGCTCGCTAAAATTAGCTCCACGTGTACACAAATTTCGAGCTTCTTTCTGTCCTCTCCTATCCCTTGAAAAAGGAGAATTCATAGTTACTGGAAGTGAGGACTCAAATGTCTACTTTTATGATTTAACTCGGCCCAAAAATACATGTGTGAACAAGCTACAGGGTCATGGGTTTCCTGTGCTGGGTATTGCCTGGAACCATGGAGAAAATTTATTGGCTTCATCTGATTTTTATGGCGTAGTAATTGTGTGGAAGAGAGAAAGAACAAATCAAAACAAACATACACAACAACGGTAG 1614 0.4263 MAEQGSAAVNDGETEPQQNKHHVLNNHNDNNDVDNNDDSSDPELFCCLLQPATADRDPEYIGIRRLLLLRKAEAGIIQRRDWRCNGKTYVAYRNYISRPRNWERDSSRAPSLHSTPGNSGRFFPSPSPHSRWSEVDSLSSGRDLQNANPAVHNHRSSFGSSVSDSDHPRHRRTESAYSFVGMHCIFDKCKASVSVLKFGHKSSDLLAYGAADGTLTVCNVSENPSVIKQLEGHSNDVTDFDFTSNNQYIASSSWDKTVRVWEIAKGICIRVIYGVCPQLCIRFHPVSIIGFPSSSHLLKINILCNLSNFSKDTVNNNLLSVGNANKEINVFNFSTGRVINKSLFDSGVTSLDHDHTGLLLFCGDAQGCIYSVNMNSHTGVLSRSHRYRSSSKPKSPVTTVQYRSFSLLARGPVLLTCNQDGNLSFFSVASEINGYLTLRCSLKLAPRVHKFRASFCPLLSLEKGEFIVTGSEDSNVYFYDLTRPKNTCVNKLQGHGFPVLGIAWNHGENLLASSDFYGVVIVWKRERTNQNKHTQQR 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00132 537 ProSitePatterns Trp-Asp (WD) repeats signature. 249 263 IPR019775 -
Vimu5g00132 537 MobiDBLite consensus disorder prediction 108 163 - -
Vimu5g00132 537 ProSiteProfiles Trp-Asp (WD) repeats profile. 230 271 IPR001680 GO:0005515
Vimu5g00132 537 MobiDBLite consensus disorder prediction 103 170 - -
Vimu5g00132 537 MobiDBLite consensus disorder prediction 1 39 - -
Vimu5g00132 537 Pfam WD domain, G-beta repeat 227 261 IPR001680 GO:0005515
Vimu5g00132 537 Pfam WD domain, G-beta repeat 487 524 IPR001680 GO:0005515
Vimu5g00132 537 SUPERFAMILY WD40 repeat-like 191 528 IPR036322 GO:0005515
Vimu5g00132 537 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 230 263 - -
Vimu5g00132 537 SMART WD40_4 444 480 IPR001680 GO:0005515
Vimu5g00132 537 SMART WD40_4 335 373 IPR001680 GO:0005515
Vimu5g00132 537 SMART WD40_4 223 262 IPR001680 GO:0005515
Vimu5g00132 537 SMART WD40_4 485 524 IPR001680 GO:0005515
Vimu5g00132 537 SMART WD40_4 179 219 IPR001680 GO:0005515
Vimu5g00132 537 Gene3D - 455 537 IPR015943 GO:0005515
Vimu5g00132 537 PANTHER WD REPEAT PROTEIN 26-RELATED 143 529 - -
Vimu5g00132 537 MobiDBLite consensus disorder prediction 15 34 - -
Vimu5g00132 537 Gene3D - 181 290 IPR015943 GO:0005515
Vimu5g00132 537 Gene3D - 302 443 IPR015943 GO:0005515