Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00124 ATGGGGGACGATGGAATGAAGAACGGTGGAGAGGGGGAGTTGGTGAAGGTGGAGCCAAAACCCAGCAATGGCTTCACCTCAAAAGTGATTGATTTGTTGGAGAAGCTGGTGGTGAAGTTTTTGTATGACACTTCACTGCCCCATCATTACCTCACTGGTAATTTTGCTCCTGTCACTGAGACCCCTCCCATAAAGGACCTTCCTGTCAAAGGGCACCTCCCGGATTGCTTGAATGGGGAGTTTGTCAGAGTTGGACCTAATCCAAAGTTTTCTCCTGTTGCCGGATATCACTGGTTTGATGGAGATGGGTGTGTGCTTCTCTTCCTATATGCAAACACATTTCTTTCAACTCACCATAACGGCAATTTCACTGTCTCTGATTTTCTTAAGTTTTGGGCTGCCAATTTATCCAGCACAAAATTCATAGTTCTGGTGTCTATTACTCCAATTTTTATTCATGTATCAATGAATTGCAGAATGATTCATGGTTTGCGCATCAAAGATGGAAAAGCTACATATGTTTCACGTTTTGTGAAAACTTCTCGTCTTAAACAAGAAGAATACTTTGGACGGTCCAAATTTATGAAGATTGGAGATCTCAAGGGTCTATTTGGACTTTTAATGGTTAACATACATATGCTGAGGACTAAATTCAAAGTGTTGGATATTTCTTATGGAGGTGGAACAGCCAATACTGCTCTTGTATATCACCATGGGAAGCTTCTAGCTCTCTCAGAAGCAGATAAACCTTATGCTATTAAAGTTTTTGAAGACGGTGATTTGCAGACACTTGGATTGCTAGATTATGATAAAAGATTGGGCCACTCCTTCACTGCTCATCCCAAAGTTGATCCATTTACTGGGGAGATGTTTACATTTGGCTATGCACATACACCACCATATATCACATACAGAGTAATTTCAAAAGATGGTTATATGCATGATCCTGTACCCATAACAGTATCAGATCCCATCATGATGCATGACTTTGCCATCACAGAGAATTATGCAGTATTCATGGATCTTCCTCTAATTTTTAGGCCAAAGGAAATGGTGAAGAATAATACATTGATATTCTCATTTGATTCAACCAGGAAAGCCCGTTTTGGTGTGCTACCTCGGTATGCTAAGGATGAAAAGAATATTAGATGGTTTGAGCTACCAAACTGCTTTATATTCCACAATGCCAATGCTTGGGAGGAGGAAGATGAAGTTGTTCTGATCACATGCCGCCTTCAGAATCCAAAGTTAGACAATGTCGGTGGGGGTGTACAGGAAAAGCATGAAAATTTCTCAAATGAGCTGTATGAAATGAGATTTAACATGAAAACTGGTGAAGCTTCTCAAAAGAAACTGTCAGCATCTGCTGTAGATTTTCCAAGAATCAATGAAAGCTACACTGGCAGGAAGCAGCGATATGTTTATGGTACCACATTAGACAACATTGCAAAAGTTACCGGTGTTATCAAATTTGATTTGCATGCCGAACCAGATCATGGAAAAGAAAAGCTTGAAGTTGGAGGAAATGTTCAGGGACTCTATGACTTGGGACCAGGAAAGTTTGGCTCGGAAGCTGTTTATATCCCTCGTGTCCCTGGAATAGACTCTGAAGAAGATGATGGATATTTGGTCTTGTTTGTACATGATGAAAATGCAGGAAAATCATTTGTGCATGTCATTGATGCAAAAACAATGTCAGCAGATCCTGTTGCGGTTGTGGAATTGCCCAATAGAGTTCCATATGGTTTCCATGCCTTCTTTGTGACTGAGGTTTGTGTTGCTTTATATATTTCAACATTGCATTTCTTCGTCTCTTTCTTTCCTCCACATTACTCAGAATGTTTATTAAGCAACCATTTTCTTCTGGGTCTATTCGGTAGTGAGGGAATGAAAATCTAA 1899 0.4013 MGDDGMKNGGEGELVKVEPKPSNGFTSKVIDLLEKLVVKFLYDTSLPHHYLTGNFAPVTETPPIKDLPVKGHLPDCLNGEFVRVGPNPKFSPVAGYHWFDGDGCVLLFLYANTFLSTHHNGNFTVSDFLKFWAANLSSTKFIVLVSITPIFIHVSMNCRMIHGLRIKDGKATYVSRFVKTSRLKQEEYFGRSKFMKIGDLKGLFGLLMVNIHMLRTKFKVLDISYGGGTANTALVYHHGKLLALSEADKPYAIKVFEDGDLQTLGLLDYDKRLGHSFTAHPKVDPFTGEMFTFGYAHTPPYITYRVISKDGYMHDPVPITVSDPIMMHDFAITENYAVFMDLPLIFRPKEMVKNNTLIFSFDSTRKARFGVLPRYAKDEKNIRWFELPNCFIFHNANAWEEEDEVVLITCRLQNPKLDNVGGGVQEKHENFSNELYEMRFNMKTGEASQKKLSASAVDFPRINESYTGRKQRYVYGTTLDNIAKVTGVIKFDLHAEPDHGKEKLEVGGNVQGLYDLGPGKFGSEAVYIPRVPGIDSEEDDGYLVLFVHDENAGKSFVHVIDAKTMSADPVAVVELPNRVPYGFHAFFVTEVCVALYISTLHFFVSFFPPHYSECLLSNHFLLGLFGSEGMKI 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00124 632 PANTHER BETA-CAROTENE DIOXYGENASE 159 589 IPR004294 GO:0016702
Vimu5g00124 632 Pfam Retinal pigment epithelial membrane protein 55 108 IPR004294 GO:0016702
Vimu5g00124 632 Pfam Retinal pigment epithelial membrane protein 160 588 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00124 Vimu-Chr5 1003902 1010222 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g00124 5 1003902 1010222 Vimu5g00124 5 1003902 1010222 ECH