Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00094 ATGGAAGAAAACAAAGGAAGAGTGTGTGTAACAGGAGGAACAGGTTTCATCGGTTCATGGATTATCAAGACCCTCCTTCAAGATGGTTACTCTGTTAACACCACTGTCAGACACAATCCAGAAACAAGTTCATTAGAATCATTGGAATTTATAGGATTTGAAGGTGTTACCTCATGTAGTGATGGTGGATTGGATTCTTGGACATTGCCAGGTTCTAGAATGGCCTTTTCTCTCCTTGAATATACCAGATTTTTCCCAAATTTTCCGCCGTCATCAGGTGCAGGTCTCACTGGTTCAGGTGCAGTTTCTGGTTCAGGTGCAGCAGAACAGAAGAAAGATGTCAGCTTTCTTACCAGCTTACCAGGAGCATCTCAAAGGCTACAAATTCTGAGTGCTGATCTGAGCAATCCAGAAAGCTTCAGTGCAGCCATTGAAGGGTGTGTTGGAGTGTTCCATGTTGCTACCCCAGTTGACTTTGAACAGAGAGAAACAGAAGAAGTAGTGACCAAAAGATCCATTGATGGTGCACTTGGCATTTTGAAGGCATGCCTGAACTGCAAGACTGTGAAGAGAGTTGTTTACACCTCTAGTGCTTCTGCTGTGATTTATAGTGGCAAAGAAGAACAAGTGATGGATGAAAGCTCTTGGACTGACGTGGATCTTCTCAGAGCTTCAAAGCCATTGGCATGGTCTTATGCAGTTTCAAAGACATTGACAGAGAAGGCAGTGCTTGAATTTGGAGAACAAAATGGCTTGGATGTTGTGACTCTAACTCCAACTTTTGCTTTTGGGTCCTTCATTATTCCAAAGCTTCCTGGCTCGGTTCATACTTCATTGAAATTTGCATTTGGAGAAAAAGATACATTTGGTTCCCTCCTTGAGGTACCTATGGTACATGTGGATGATGTGGCTAGAGCACATATATTTCTGCTGGAGAATCAAAATCCAAAAGGGAGCTGTTTCACCAAAATGGAAGGTACAAAGATACCAGATTTATCATCAAAGAAGCTCACAGATGCTGGATTTGTGTTCAAGTATGGAGTTGAGGAGATGCTTGATGATGCAATTCAATGCTGCAAGGAAAAAGGGATATCTCTTAAGGAATAA 1107 0.421 MEENKGRVCVTGGTGFIGSWIIKTLLQDGYSVNTTVRHNPETSSLESLEFIGFEGVTSCSDGGLDSWTLPGSRMAFSLLEYTRFFPNFPPSSGAGLTGSGAVSGSGAAEQKKDVSFLTSLPGASQRLQILSADLSNPESFSAAIEGCVGVFHVATPVDFEQRETEEVVTKRSIDGALGILKACLNCKTVKRVVYTSSASAVIYSGKEEQVMDESSWTDVDLLRASKPLAWSYAVSKTLTEKAVLEFGEQNGLDVVTLTPTFAFGSFIIPKLPGSVHTSLKFAFGEKDTFGSLLEVPMVHVDDVARAHIFLLENQNPKGSCFTKMEGTKIPDLSSKKLTDAGFVFKYGVEEMLDDAIQCCKEKGISLKE 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00094 368 CDD FR_SDR_e 8 342 - -
Vimu5g00094 368 Gene3D - 96 365 - -
Vimu5g00094 368 Gene3D - 5 56 - -
Vimu5g00094 368 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 6 326 - -
Vimu5g00094 368 FunFam Dihydroflavonol reductase 101 326 - -
Vimu5g00094 368 Pfam NAD dependent epimerase/dehydratase family 108 314 IPR001509 -
Vimu5g00094 368 Pfam NAD dependent epimerase/dehydratase family 8 42 IPR001509 -
Vimu5g00094 368 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 362 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00094 Vimu-Chr5 708715 715416 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00094 2 37 Miscellaneous Gene Families AT4G27250 56.757 2.27e-07 50.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g00094 5 708715 715416 Vimu5g00094 5 708715 715416 ECH