Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00076 TTGGTGAATCATTTCACAATCAATTTATGTTACAAGACAGAAAGTGTGATCATGAGAACTGCAAGCTGTTCTCTCATAGTGTTCTTTATTCTGCTGGTTGAGTCAGTGAATTCTCTCAACCGTAGCAGTTTTCCTGTGAATTTCTTATTTGGGGTTGCCTCTTCTGCTTACCAGTATGAAGGTGCAGCAAGTGAAGGGGGTAGAGGACCAAGTATATGGGACACTTTTACTCACAAATATCCATATAGGATAAGGGATCAAAGTAGTGGAGACCTTGTTGTTGATTCTTATCACCGTTACAAGGAAGATGTAGGTATAATGAAGGACATAGGATTTGATGCATACAGATTCTCTATCTCATGGTCTAGGATTCTACCTGGTGGAAGGCTGAAGGGAGGTACAAACAGAGAGGGCATCACATATTACAACAATCTTATCAATGAACTGCTATCAAATGGTCTGAGATTAGGGCTGCAACCCTTTGTAACTCTATTTCATTGGGATCTCCCTCAAGCCCTTGAAGATGAATATGGTGGCTTTCTAAGCCCCAATATTGTGAAGGATTTTGCAGACTATGCAGAGGTATGCTTCAGAGAATTTGGTGATAGAGTGAAGCACTGGATCACTTTAAATGAGCCAGTCACCTTCACCACACAGGGTTATGGAAATGGATTATTTGCACCAGGAAGATGCTCCAAGTGGTTGCCTTTCAACTGCAGTGAAGGTGATTCTAGCACTGAGCCCTATGTTGTTACTCACCACCAGATTCTTGCTCATGCAGCTGCTGTCAAAGTCTATAGAGACAAGTACCAGATTTCTCAAAAAGGAAAAATTGGTATAACGTTGAACTCTCCATGGATAATGCCACTTTCCCAGTCAAAAGAAGACATCAATGCTGCATTTAGGGCCATTGTTTTCTTGTATGACTGGTTTATGGAGCCACTAAATTCTGGATCATACCCTGTTGAGATGGTTAATAACATTGGTGAAAGATTGCCAAAATTTTCCATGGAACAGTCGTTGATGGCCAAAGGATCCTTTGATTTCTTAGGACTTAACTACTACACTGCAGCTTATGCAGCCAATGTCCCTTGCACAAGAGAAAACCAAACCATGTTCACAGATTCATGTGTGTTTCTCACATGTAAGGCTCAATAG 1158 0.4111 MVNHFTINLCYKTESVIMRTASCSLIVFFILLVESVNSLNRSSFPVNFLFGVASSAYQYEGAASEGGRGPSIWDTFTHKYPYRIRDQSSGDLVVDSYHRYKEDVGIMKDIGFDAYRFSISWSRILPGGRLKGGTNREGITYYNNLINELLSNGLRLGLQPFVTLFHWDLPQALEDEYGGFLSPNIVKDFADYAEVCFREFGDRVKHWITLNEPVTFTTQGYGNGLFAPGRCSKWLPFNCSEGDSSTEPYVVTHHQILAHAAAVKVYRDKYQISQKGKIGITLNSPWIMPLSQSKEDINAAFRAIVFLYDWFMEPLNSGSYPVEMVNNIGERLPKFSMEQSLMAKGSFDFLGLNYYTAAYAANVPCTRENQTMFTDSCVFLTCKAQ 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00076 385 FunFam Beta-glucosidase 7 31 385 - -
Vimu5g00076 385 Pfam Glycosyl hydrolase family 1 42 367 IPR001360 GO:0004553|GO:0005975
Vimu5g00076 385 Gene3D Glycosidases 29 383 - -
Vimu5g00076 385 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 48 62 IPR033132 -
Vimu5g00076 385 PANTHER GLYCOSYL HYDROLASE 43 367 IPR001360 GO:0004553|GO:0005975
Vimu5g00076 385 SUPERFAMILY (Trans)glycosidases 29 371 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00076 Vimu-Chr5 573565 576181 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g00076 5 573565 576181 Vimu5g00076 5 573565 576181 ECH