Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g02225 ATGGATTGTATGGATGATGACAGCATGAGTGGTATTCTTTCCTGTGATGACCCTTCAAGGAGAAATGCTGACGAGGAAACGATGGGGGTGGAAGAAGAAGAAGAAGAAGAGGAAGAGGAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGTGGTGACAGTGGAGGAACTGGAGACAAGGATGTGGAGAGATGGCATGATGTTGAAGAAGCTGAAGGAAGAGAAGAGGGATAAGGAGAAAGGAGAAACAGTGGAGATGATGAAGAAGAAGGCACTGATTCGTGCACAAGACACAGTGCTGAAGAACATGGTGAAGATGATGGAGATTTGTGGTGTTCGTGGCTTCGTTTATGGCATCATTCCTGAGAAGGGAAAACCAGTAAGTGGAGCTTCTGATAACCTCAGAGGTTGGTGGAAGGATAGGGTCAAGTTTGATCACAATGGTCCTGCTGCTATGCTCAGGTCTAACTTTTCTTATCATCAAACTCATATTATATATTACTTCAAAATTATTCATATAAATTCAATAAACCATAAACATGTTTAA 570 0.414 MDCMDDDSMSGILSCDDPSRRNADEETMGVEEEEEEEEEEEEEEEEEEEEEEEEEEEEVVTVEELETRMWRDGMMLKKLKEEKRDKEKGETVEMMKKKALIRAQDTVLKNMVKMMEICGVRGFVYGIIPEKGKPVSGASDNLRGWWKDRVKFDHNGPAAMLRSNFSYHQTHIIYYFKIIHINSINHKHV 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g02225 189 MobiDBLite consensus disorder prediction 28 62 - -
Vimu4g02225 189 MobiDBLite consensus disorder prediction 1 66 - -
Vimu4g02225 189 Coils Coil 20 68 - -
Vimu4g02225 189 Gene3D - 89 170 IPR023278 GO:0003700|GO:0005634
Vimu4g02225 189 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 44 162 IPR006957 GO:0003700|GO:0005634
Vimu4g02225 189 Pfam Ethylene insensitive 3 63 163 IPR047091 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g02225 Vimu-Chr4 24355835 24356404 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g02225 43 162 EIL Transcription Factor Family AT2G27050 51.969 3.70e-38 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Vimu4g02225 EIN3 5.9e-41 No_clan