Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g02170 ATGGATGTGGCTCGTGAGATTAGGTTGGCAAAAGAAGCTGAAGCAGAAATGGATCTTCATGTGGCAAATGCAGGAAAGAGGGTTGACCAAGAAATATATAAGGTCACTGCTAATAATCCTGGTCTCGTTCAAGAAGTCACTCTCATGGATCAAGCTGCAAAATCAAAGCCTGCAAATGAAAAGAAGCTAGTTGATGAAGTCTCCGGTTGGCTCAGAATCTACGATGACGGTTCGGTCGACCGGACATGGACCGGACCGGCTCAGTTCAAGTTTTTGGCTGATCCGGTTCCTTCTCATGAAAAATTTATAGATGGTATTGCTGTTCGTGATACCATCGTTTCTCATGAAGGTCGTGACCTCCGTGTTCGGTTATACTTGCCAGAGAAAGCGTTGGAAAATAAAAACAAATTACCCATCATTCTTCATTTTCAGGGTGGTGGGTTTTGCATCAGTGAACCGGACTGGTTCATGTACTACCAAATTTACGTCCGAATTGCCCTTTCAACTCAGGCAATTGTGGTTTCTCCTTTCCTCCGCCGTGCACCGGAGCACCGTCTCCCGACCGCCATTGATGACGCCTTTGACACCCTCCTCTGGCTCCGATCTGTGGCCCGGTCCGGTTCGCGTGAACCGTGGCTCGAGCAACATGGGGACTTCAACCGGGTTTTTCTCATAGGGGACAGTTCTGGCGGGAACGTGGTGCATGAGGTGGCTTCAAGGGCCGGTTCGGTGGACCTAAGCCCGGTTCGGGTTGCAGGAGCGATCCCGGTTCACCCCGGGTTTGTCCGGTCGGAGCGGAGCCGGTCCGAGCTGGAAATGCCGCAATCACCGTTTTTAACGTTGGACATGCTCGACAAGTTCCTAGAGTTAGCACTGCCTGTCGGGGCGACGAAGGACCACCCCATAACGTGCCCGATGGGTGCGGCGGCACCGCCGCTTGAAGGGCTGAAACTGCCGGCGGTGCTGCTGTGCGTGGCGGAGTTGGACTTGGTGAGGGACACGGAGATGGAGTACTACGAGGCCATGAAGAAAGCCAACAAGGACGTTGAACTTTATGTGAGCCATGGAATGGGTCATAGTTTTTATTTGAACAAGGTTGCTGTGGATATGGATCCCAACGTTAGTGCAAAAACCGATGCTTTCATAACTAGGATCAAGGAGTTCATTCAGGAGCACTGA 1179 0.5157 MDVAREIRLAKEAEAEMDLHVANAGKRVDQEIYKVTANNPGLVQEVTLMDQAAKSKPANEKKLVDEVSGWLRIYDDGSVDRTWTGPAQFKFLADPVPSHEKFIDGIAVRDTIVSHEGRDLRVRLYLPEKALENKNKLPIILHFQGGGFCISEPDWFMYYQIYVRIALSTQAIVVSPFLRRAPEHRLPTAIDDAFDTLLWLRSVARSGSREPWLEQHGDFNRVFLIGDSSGGNVVHEVASRAGSVDLSPVRVAGAIPVHPGFVRSERSRSELEMPQSPFLTLDMLDKFLELALPVGATKDHPITCPMGAAAPPLEGLKLPAVLLCVAELDLVRDTEMEYYEAMKKANKDVELYVSHGMGHSFYLNKVAVDMDPNVSAKTDAFITRIKEFIQEH 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g02170 392 Gene3D alpha/beta hydrolase 47 391 IPR029058 -
Vimu4g02170 392 PANTHER ARYLACETAMIDE DEACETYLASE 64 363 - -
Vimu4g02170 392 Pfam alpha/beta hydrolase fold 140 362 IPR013094 GO:0016787
Vimu4g02170 392 SUPERFAMILY alpha/beta-Hydrolases 61 392 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g02170 Vimu-Chr4 23990885 23999480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g02170 47 382 Carbohydrate Esterase AT1G68620 31.503 1.10e-50 171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g02170 4 23990885 23999480 Vimu4g02170 4 23990885 23999480 ECH
Vimu4g02170 4 23990885 23999480 Vimu5g00326 5 2995651 2996649 PCT