Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g02156 ATGAGTGCAGCTGAAGATCTTGTGAACAAAACAGAAGGTGGTGGAAAAGAAAGCCAGGACAAACACATAACAGGTCTTACAGAAGATCCTTTGAAAAACAATGATGGTTCTTCTGTAAATCCTGTAAATCACCAGACAGTAGATGGTGATGAAAATCCTGCAATCGATCAGTTAAAGGGTCCAGTAAATATTGTGAACTACCAAGCTGGTGGGGCAGAAAGACCTGTCAGCGACCAAACAGATGTTGAACGAAATCTTACTAGTGAACAAGTGGGTATTGCAGGAAATATGGTAAACAACCTAGCAGGTGTTGCAGAAACTCCCTCAAAGGAACACATAGCTGGTGGCGCAGAAAATTCTGTACACAATGAGGCAGGGGCATCAATAAATGGTATGGAGGACGAAGCTGGTGGTGTAGAAAGTCCTATAAACAGCATTGTAGTTGCTGCAGAAGTTTCTGTAAGAACCCAAGCAAATGCTACAGCAAACAGAAAAGAAAATGCAGTCGAAACCCCTGTAGCCTGCAAACCAGATCGCCTTCCGGAAGAAGCACAGGAGATACTGAAATCATTGGCTGGTCACTGGGAGGATGTACTTGATGCAAATGCATTGCAGGTCTTCCCTCTCAAAGGAGCAATGACGAACGAGGTATTTCAGATAAAGTGGCCAACTTCGACAGGAGAAACTTCACGAAAGGTTATTGTTAGAATTTATGGCGAGGGTGTGGACGTGTTCTTTGATAGGAGTCAGGAAATTGAAACATTTGAATTCATGTCAAAGAACGGGCAAGGTCCTCGTCTACTAGGACGGTTTGCAAATGGTCGTGTTGAAGAGTTTATCCACGCACGGACATTATCAGCAGCTGATCTACGTGATCCTACCATTTCTGCTCTTATAGCGGCCAAATTGAAGGATTTTCATGATTTAGATATGCCTGGTGAAAAGGAAGTCCACCTTTGGGATAAATTGCGAAATTGGCTTAGTGAAGCCAAACGTTTATCATCCCCTAAAGAAGTTGAAGCATTTTATTTGGACACAATAGACAAAGAAATCGCCATGTTGGAAAAGGAACTATCAGGCTCACACCAAATGATAGGATTTTGTCACAATGATTTACAATATGGTAACATAATGCTTGATGAAGAGACCAATTCTGTGACCATCATAGACTATGAATACGGGAACTATAATCCAGTAGCATTTGATATAGCCAACCACTTCTGTGAGATGGCTGCTAACTATCACACAGAAGAGCCTCATATCCTTGACTACAATAAATATCCAGATTTTGAGGAGCGTAAAAGATTTGTGCTGGCATACTTGAGTGCCTCTGGTCAACAGGGCAGTGACAATGAAGTGGAGCAACTACTTCAAGAAATTGAAAAGTATACGCTTGCAAATCATCTATTCTGGGGCGTTTGGGGAATAATCTCGGCACAAGTAAACACAATCGACTTTGACTACAAGGAGTATGCTAAACAAAGGTTTCAAGAGTACTGGGCCAGAAAACCTTATCTTTTAATAAACTCCGAATCACCTTCTCCTTATAATGCGCCCGAGGGTACAGGAGAACTAGCATCAGCAGGTCCCACCCACAAATCGAGGAACTCTGGTATCTTCAGGAAGATGAAGAGAGTTTTGGGTCTGGGTTTGTTCAGGTCCAGGACTTAG 1671 0.4243 MSAAEDLVNKTEGGGKESQDKHITGLTEDPLKNNDGSSVNPVNHQTVDGDENPAIDQLKGPVNIVNYQAGGAERPVSDQTDVERNLTSEQVGIAGNMVNNLAGVAETPSKEHIAGGAENSVHNEAGASINGMEDEAGGVESPINSIVVAAEVSVRTQANATANRKENAVETPVACKPDRLPEEAQEILKSLAGHWEDVLDANALQVFPLKGAMTNEVFQIKWPTSTGETSRKVIVRIYGEGVDVFFDRSQEIETFEFMSKNGQGPRLLGRFANGRVEEFIHARTLSAADLRDPTISALIAAKLKDFHDLDMPGEKEVHLWDKLRNWLSEAKRLSSPKEVEAFYLDTIDKEIAMLEKELSGSHQMIGFCHNDLQYGNIMLDEETNSVTIIDYEYGNYNPVAFDIANHFCEMAANYHTEEPHILDYNKYPDFEERKRFVLAYLSASGQQGSDNEVEQLLQEIEKYTLANHLFWGVWGIISAQVNTIDFDYKEYAKQRFQEYWARKPYLLINSESPSPYNAPEGTGELASAGPTHKSRNSGIFRKMKRVLGLGLFRSRT 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g02156 556 Gene3D Phosphorylase Kinase; domain 1 192 279 - -
Vimu4g02156 556 SUPERFAMILY Protein kinase-like (PK-like) 178 507 IPR011009 -
Vimu4g02156 556 Gene3D - 239 500 - -
Vimu4g02156 556 MobiDBLite consensus disorder prediction 10 28 - -
Vimu4g02156 556 Pfam Choline/ethanolamine kinase 230 431 - -
Vimu4g02156 556 MobiDBLite consensus disorder prediction 1 45 - -
Vimu4g02156 556 MobiDBLite consensus disorder prediction 30 45 - -
Vimu4g02156 556 MobiDBLite consensus disorder prediction 517 536 - -
Vimu4g02156 556 PANTHER CHOLINE/ETHANOALAMINE KINASE 163 508 - -
Vimu4g02156 556 CDD ETNK_euk 204 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g02156 Vimu-Chr4 23858440 23863171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g02156 169 511 Acyl Lipid Metabolism Gene Families AT1G74320 65.598 6.48e-174 493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g02156 4 23858440 23863171 Vimu4g02156 4 23858440 23863171 ECH
Vimu4g02156 4 23858440 23863171 Vimu5g00325 5 2985685 2989137 PCT