Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01933 ATGCAATTTGAAATGGTGTTCACCCTGTTGTTGTGTCCTCTGCTCCTATCCTCAGCTTTTGTATGGGCACTGGCACCTCTTCCACCATACCAAGGATGCGATTTTTCTGAGGGAAAATGGGTCATTGATGAACCCTCTTCCCACCCTCTCTATGATGCTTCAAGGGACTGTCCTTTCATTGGCCAAGGATTTGATTGCTTAAGAAATGGCAGACCAGATAATGAATACCTCAACTATAGATGGAAGCCCTCTGGTTGTGACCTTCCAAGGTTTGATGGTAAGAAGTTCTTGGAGAGAAACACAGGAAAGAAGATAATGTTTGTGGGGGACTCCATAAGTAACAACATGTGGCAGTCACTCACTTGTTTGCTTCACATTGCAGTCCCAAACTCAACTTACATTTCAACAACTCAGACACAGCAACTTCTTGTGTTTTCGTTTCCGGTAGTGGAGTATAAAGCTTCAATCATGTGGTTGAAAAATGGGTTCTTAGTGGATTTGGTTATTGATAAAGAAAAAGGCAGGATTTTGAAATTGGACACCATTAGCTCTGGGGATCAGTGGAAAGGAGTTGATGACACTCTCAAGCGTAATGAAACCTTTGATTTGAGCTACCTTTTTGGGACTGAACTGATCAAGGACATGGATCACATGGAAGCTTTCAAGATTGGACTCACTACTTGGGCTAAATGGGTTGATTCTAACATTGACCCTTCAAAGACTAGAGTTTTGTTTCAGGGAATTGCTGCTTCTCATGTTGACAAAAAGGGGTGCCTAAGGCAAACTAAACCAGAGGAAGGAGCAATGGCAGCATATCCTGGTGTGGATATTGTGAAGACAGTTATCAGTAACATGGCAAATCCTGTAGAATTGCTAGACATCACTGTGCTTACACAACTGAGGAGAGATGGTCACCCCTCTATCTACACAGGGCGTGGCACTTCTTTTGATGACTGTAGTCACTGGTGTCTGGCCGGTGTTCCTGATGCTTGGAATGAAATTTTGTATGCTGTTCTACTTGGAAATTAG 1029 0.4295 MQFEMVFTLLLCPLLLSSAFVWALAPLPPYQGCDFSEGKWVIDEPSSHPLYDASRDCPFIGQGFDCLRNGRPDNEYLNYRWKPSGCDLPRFDGKKFLERNTGKKIMFVGDSISNNMWQSLTCLLHIAVPNSTYISTTQTQQLLVFSFPVVEYKASIMWLKNGFLVDLVIDKEKGRILKLDTISSGDQWKGVDDTLKRNETFDLSYLFGTELIKDMDHMEAFKIGLTTWAKWVDSNIDPSKTRVLFQGIAASHVDKKGCLRQTKPEEGAMAAYPGVDIVKTVISNMANPVELLDITVLTQLRRDGHPSIYTGRGTSFDDCSHWCLAGVPDAWNEILYAVLLGN 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01933 342 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 17 335 IPR029962 GO:0016413
Vimu4g01933 342 Pfam PMR5 N terminal Domain 32 87 IPR025846 -
Vimu4g01933 342 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 88 337 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01933 Vimu-Chr4 21409182 21410910 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g01933 4 21409182 21410910 Vimu4g01933 4 21409182 21410910 ECH
Vimu4g01933 4 21409182 21410910 Vimu5g00444 5 4320142 4322118 PCT