Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01603 ATGTTTTATTGCTTGCAGTGCCTTGTAGACTCAAAAGACAGAATCAGGAAATTGTTCAAGAAGGTTGAACTATCGGTTTCTTCATATGATACAGCTTGGGTGGCAATGGTAACCTCTCCAGCTTCTCCTCATAGCCCACTTTTCCCTCAGTGCTTAAATTGGTTGTTGGCTAATCAACACTCAGATGGTTCCTGGGGTCTTCCTGATCGCCATCCACTACTAATGAATGATGCTCTCTTATCTACCTTAGCATGCATCCTTGCTCTAAAGCAATGGGGTGTTGGAGAAGATCAAATTAACAGGGGTCTTCAGTTTATTCAGTCAAATATTACCTCAATCAAGGATGAGAAGCAGCACCTTCCAATAGGATTTGGTATCAATTTTCCTTCTTTAATAGAATATGCACAAAATTTGGGCATTAATCTTCCAATTGGAGCTACTATCTTGGATACAATGATCCAAAAGAGAGAAATAGAACTGCAAAGAGGTAAACAAAGCAATTCAGAAGGGTGGAGAGCATATCAAGCATATGTTTCAGAAGGAATGCATCATTCACAAGATTGTAAAACAATCTTGAAATATCAAAGAAAGAACGGATCTTTGTTTAATTCACCTGCTACAACAGCAGCTGTTTTTCAGCGCCTTAAGAATGCTGAATGTCTTGGTTACCTCCAATCTGTACTAGAAAAATTTGGAAATGCAGTTCCGACAATTCACCCTCTGGATATATATGCTCGTCTCTGTATGATGGATAGTCTTGAAAGGTTGGGTATTAATCATCATTTCAAAGAGGAAATTCGTAGTGTATTGGATGATACATACAGCCTTTGGGTGCAAGGAGTGGAAGATATATTCTTAGATCCCACCACCTGTGCAATGGCATTTCGTATCTTGCGTCTCAATGGCTATGATGTATCTTCAGATCCATTTTATCAATATTCTGAAGATAAATTTGCTGACTCCTTGAAAGGGTACCTGAAGGATGTTGGTGCTGTTATAGAGCTTTATAGGGCTTCACAAGCCATTATACATCCTGATGAATCAATTTTGGTGAGACAGAGTTTGTGGACGAAACAGCTTCTGAAGCAGGAATCATCCCCTCACAGATTATATGCTGATAAGCTTCGTAGTTATGTCGACCAAGAGGTCAAAGATGTTCTTAATTATCCTTATCATGCAAATTTGGAGCGATTGTTAAACAGGAGATCAATGGAGTACTACAATGTAGAAGAAACAAGAATTTTAAAATCATCGTATAGATGGGTTGTTGAGAACAGATTAGACCAACTACAATTTGCAAGGCAGAAACTGGCCTACTGTTACTTCTCTGTTGCTGCTACACTTTTCCCCCCTGAACTTTCTGATGCTCGCATATCATGGGCAAAAAATGGGGTGCTCACAACAGTTGTTGATGATTTCTTTGATGTTGGGGGTTCTGAAAAGGAACTAGTTGACCTTATTCAACTAGTTGAGAAGTGGGATGTAGATATCAACACTGCTTGTTGTTCTGAGACAGTTAAGATTATATTTTCCGCAATTCACTCCACAGTTTGTGAGATTGGAGAGAAATCAGTCAAGCGACAAGGACATAATGTTAAAAACATTGTTATCAAGATTTGGCTGGATCTGATTCAGTCAATGTATAAAGAAGCTGAGTGGGCACGTACAAAGACTGTGCCAACAATTGATGATTATATGGAAAATGCATACATATCATTTGCCTTAGGTCCAATTGTACTTCCTGCCCTCTATCTTGTAGGACCTAAGCTTTCAAATGAAGATGCTGAAACTCATGAGTTGAACCATCTCTATAAGCTCATGAGTACATGTGGTCGTCTTCTTAATGACATTCACAGTTTTAAGAGAGAATCTGAGGAGGGGAAATTGAATGCACTGTCTTTGCATATTGCTAATGACAATACTGCCGAAGAAGCTATGGAAAAATTGAATGGTATTGCTGAGGAGAAGAGAATAGAACTGCTGAGATTAATTTTGCAGGAAAAAGGAAGTGTAGTTCCCAGAGATTGCAAGGATTTGTTTTGGAAAATGATGAAAGTTTTACATCTATTTTACATTAAGGATGATGGATTTACTTCAAATGAGATGTACTCTAGTGTAAAGGCAGTGATTAAAGATCCTGTCATCTTTGATGAATTGTTAGAACATGTTTGGTAG 2175 0.3834 MFYCLQCLVDSKDRIRKLFKKVELSVSSYDTAWVAMVTSPASPHSPLFPQCLNWLLANQHSDGSWGLPDRHPLLMNDALLSTLACILALKQWGVGEDQINRGLQFIQSNITSIKDEKQHLPIGFGINFPSLIEYAQNLGINLPIGATILDTMIQKREIELQRGKQSNSEGWRAYQAYVSEGMHHSQDCKTILKYQRKNGSLFNSPATTAAVFQRLKNAECLGYLQSVLEKFGNAVPTIHPLDIYARLCMMDSLERLGINHHFKEEIRSVLDDTYSLWVQGVEDIFLDPTTCAMAFRILRLNGYDVSSDPFYQYSEDKFADSLKGYLKDVGAVIELYRASQAIIHPDESILVRQSLWTKQLLKQESSPHRLYADKLRSYVDQEVKDVLNYPYHANLERLLNRRSMEYYNVEETRILKSSYRWVVENRLDQLQFARQKLAYCYFSVAATLFPPELSDARISWAKNGVLTTVVDDFFDVGGSEKELVDLIQLVEKWDVDINTACCSETVKIIFSAIHSTVCEIGEKSVKRQGHNVKNIVIKIWLDLIQSMYKEAEWARTKTVPTIDDYMENAYISFALGPIVLPALYLVGPKLSNEDAETHELNHLYKLMSTCGRLLNDIHSFKRESEEGKLNALSLHIANDNTAEEAMEKLNGIAEEKRIELLRLILQEKGSVVPRDCKDLFWKMMKVLHLFYIKDDGFTSNEMYSSVKAVIKDPVIFDELLEHVW 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01603 724 Gene3D Farnesyl Diphosphate Synthase 413 721 IPR008949 -
Vimu4g01603 724 Gene3D - 27 240 - -
Vimu4g01603 724 Pfam Terpene synthase family, metal binding domain 415 657 IPR005630 GO:0000287|GO:0010333|GO:0016829
Vimu4g01603 724 SFLD Terpene Cyclase Like 1 N-term 12 420 - -
Vimu4g01603 724 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 197 411 IPR008930 -
Vimu4g01603 724 CDD Terpene_cyclase_plant_C1 240 713 IPR044814 GO:0010333|GO:0016102
Vimu4g01603 724 SUPERFAMILY Terpenoid synthases 415 714 IPR008949 -
Vimu4g01603 724 FunFam Ent-copalyl diphosphate synthase, chloroplastic 219 437 - -
Vimu4g01603 724 Gene3D - 241 412 IPR036965 GO:0010333|GO:0016829
Vimu4g01603 724 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 6 420 - -
Vimu4g01603 724 FunFam Ent-kaur-16-ene synthase, chloroplastic 408 716 - -
Vimu4g01603 724 Pfam Terpene synthase, N-terminal domain 189 380 IPR001906 GO:0010333|GO:0016829
Vimu4g01603 724 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 28 219 IPR008930 -
Vimu4g01603 724 FunFam cis-abienol synthase, chloroplastic 25 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01603 Vimu-Chr4 17173098 17177168 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g01603 4 17173098 17177168 Vimu4g01603 4 17173098 17177168 ECH