Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01574 ATGTGCAGCTCTAAGGCCAAAGTTACTGTTGGCATAGAGGGTGTTGCTGCTGCTGCTGCTGCTGCAACCACTACTGTCATGCCTTCTTCAGTGGCTAGAATCAATGGAAGGCCGGTCCTTCAACCAACTTGCAACCGTGTTCCAAACCTTGAAAGGAAGAATTCAATCAAGAAAGTGCAGCCACCAAAGTCACTTTCTCCACCATCACCACCTCTTCCTAGTAAGACCTCATTGACACCCCCAGTTTCTCCAAAGTCTAAGTCCCCAAGGCTTCCTGCAGTGAAGAGAGGCAGTGACAACAATGGACTCAACACTAGCTATGAAAAGATTTTCATCCCAAAAAGCTCCTCAAAAGCTCCAACTTTGGAGAGAAAGAAGTCCAAGAGCTTCAAGGAAGGGTCCTGTGCGCCAGCCTCTGTAGAGGCTTCATTCAGCTACTCGTCCTCTTTGATCACTGACTCCCCGGGGAGCATAGCTGCTGTGAGGAGAGAACAGATGGCACTGCAGCAGGCGCAGAGGAAAATGAAGATTGCCCATTATGGAAGATCAAAGTCTGCTAAGTTTGAAAGAGTTTTTCCTCTTGATCCTTCAACCACTGGTCTTACACCAAAGCCAACTGACGAGGAGAAGAGATGCAGCTTTATCACAGCCAATTCTGATCCCATCTATATTGCTTATCATGACGAGGAATGGGGAGTTCCAGTTCATGATGACAAGATGTTATTTGAGCTTTTAGTCTTAAGCGGTGCTCAAGTTGGATCTGATTGGACCTCAACCTTGAAGAAACGCCAAGATTTCAGAGCTGCATTTTCAGAATTTGACGCAGAAACTGTGGCCAACTTAACTGATAAGCAAATGATGTCAATTAGTTCAGAATACGCCATTGACATAAGCAGAGTCCGAGGAGTTGTTGATAATGCTAACCAAATTTTAGAGATTAAGAAAGACTTTGGATCATTTGACAAGTACATTTGGGGGTTTGTGAATCATAAACCCATCTCCACTCAATACAAGTTTGGGCATAAGATCCCAGTGAAGACCTCAAAATCAGAGAGCATAAGCAAAGACATGGTGAGGAGGGGATTCAGGTTCGTTGGTCCAACAGTGACTCCTCCCAATAAAGCCAATTTCAACTCAGAAATAAGGAAAAAGAGATTGACCCTGAAGAGCTCAAGATATAAATTAAGAGTTATTATGTATGCTGAAGATGTAGTGGGAGGAGGCTTAGGGAACAGTGACCATGTGCATGTGCTATTGGGAGGCAAGGGCATGTGTGGTGTCAGTTTGCTTTCTAGACCATGTGACCCATCAGACTTTGCATTATTTGGTTCCCTTTAA 1338 0.4447 MCSSKAKVTVGIEGVAAAAAAATTTVMPSSVARINGRPVLQPTCNRVPNLERKNSIKKVQPPKSLSPPSPPLPSKTSLTPPVSPKSKSPRLPAVKRGSDNNGLNTSYEKIFIPKSSSKAPTLERKKSKSFKEGSCAPASVEASFSYSSSLITDSPGSIAAVRREQMALQQAQRKMKIAHYGRSKSAKFERVFPLDPSTTGLTPKPTDEEKRCSFITANSDPIYIAYHDEEWGVPVHDDKMLFELLVLSGAQVGSDWTSTLKKRQDFRAAFSEFDAETVANLTDKQMMSISSEYAIDISRVRGVVDNANQILEIKKDFGSFDKYIWGFVNHKPISTQYKFGHKIPVKTSKSESISKDMVRRGFRFVGPTVTPPNKANFNSEIRKKRLTLKSSRYKLRVIMYAEDVVGGGLGNSDHVHVLLGGKGMCGVSLLSRPCDPSDFALFGSL 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01574 445 MobiDBLite consensus disorder prediction 63 78 - -
Vimu4g01574 445 SUPERFAMILY DNA-glycosylase 210 370 IPR011257 GO:0003824|GO:0006281
Vimu4g01574 445 MobiDBLite consensus disorder prediction 36 105 - -
Vimu4g01574 445 Gene3D Hypothetical protein; domain 2 209 371 - -
Vimu4g01574 445 Pfam Methyladenine glycosylase 217 369 IPR005019 GO:0006284|GO:0008725
Vimu4g01574 445 PANTHER OS04G0501200 PROTEIN 30 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01574 Vimu-Chr4 16773641 16776107 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g01574 4 16773641 16776107 Vimu5g00854 5 11172374 11174715 PCT