Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00438 ATGAAGAATCTTCTGATTAATGGTCATGAGTTGAACTGCAGTTCGGATTTAGAAGTTGATGATATTAGATGCCCCAATATAGCAGAAAAAGATGTCAGTGATGAAGAGATTGAAGCAGAAGAATTGGAGCGGCGGATGTGGAAGGATCGAATCAAACTCAAAAGGCTAAAGGAAAGACAGAAGCTGGCGATTCAGCAAGCTGCAGAGAAGCAAAAGCCAAGGCAGTCCAGTGATCAAGCTCGTAGGAAGAAAATGTCAAGAGCACAGGATGGGATTCTGAAGTATATGCTGAAGCTTATGGAAGTCTGCAAAGCCCGTGGATTTGTATACGGGATCATTCCTGAGAAGGGAAAACCAGTCAGTGGTTCATCTGATAACATTAGAGCATGGTGGAAGGAGAAGGTAAAGTTTGATAAGAATGGCCCTGCAGCTATATCCAAGTATGAAGCTGATTGTCTTGCTATGAGTGAGGCCGATAACAGCCGAAATGGTAACTCGCAGAGCATTCTCCAAGACCTGCAAGATGCAACACTTGGATCACTTTTGTCTTCTTTGATGCAACATTGTGATCCGCCTCAACGGAAGTATCCTTTGGAAAAGGGTGTACCTCCACCATGGTGGCCAACTGGTAATGAAGATTGGTGGTCACAGTTGAATTTACCTCATGGTCAGAGTCCTCCTTATAAGAAGCCACATGATTTGAAGAAGATGTGGAAAGTGGGAGTGCTCACTGCTGTTATAAAGCACATGTCACCTAATATTGCAAAAATAAGGAGGCATGTTCGGCAGTCAAAATGCTTGCAGGACAAGATGACAGCAAAGGAAAGTGCAATTTGGTTGGGGGTATTAAGTCGGGAAGAAGCTCTCATTAGGCAGCCCAGTAGTGACAATGGTACATCTGGAGTAACTGGAATGCTACCTGGTGTTCCTGCTGAGAATAAGCAAGCTGCTACCAGTAGTGCAAGCAACTATGATGTTGATGGCACTGATGATGGCATTGGTTCTGTTTCGTCTAAAGAGGATAGGAGAATTCAGATTGTGGAAACTGAACCACCAGTTAACTCGCGCAGGGTTAGGAAGCCTGTCCAAGATAGAGATCAATCTAAGCAGCGACCGAGAAAAATCCGAGTGACATCAAGGACTGTTGACAAACCACCAGCACAATCTGACAATGAAGTTTTACATGCTGAGCCAAGAAGTAAAGGGCTCAATATTAACCAGACAGGAGCAGAAGTAGGTCGAATCCAGATTCATGGAAATGAACAGTCCAATGAGACAGATTCTGCTGCAAGGCCACTGGAAAAGGAGCTTGAGGTGCCTGCACAACTACCAGCACCCGAGTTTGATCATTACTCTTATTTACATACAAACAACTTAATTTCCACAGAAAGTATTTATACGAGTGGAAGGCCAATACACTATCCTGAGTTGCAAAACCCTGACATGCAGCATGAACCCACATATAATCTTTATAATCCAGCAGCAGCAGGGTATGATCCTAGTCATAGGCAGCAGCTACATCCTGGGAACAACAGTGAAGGAAGGCCAGAGATTGATGCAGTTCATGCACAAGCTGTGCATATGAAAGGGGATGAAATTACTGGAGGAGATTTGCAATATTTTGGTAAAGATGCATTTCAGAACGAGCTTGATAGACCTATTGATCACCCTTTCTTTGGATCACCACTTAGTAGCATGTCATTAGATTTTGGAGGACTTAATAGTCCCTTCCATTTAGATGATTTCTTGGGTGATGATGAAATGATACAGTACTTTGGAGCATAA 1785 0.4336 MKNLLINGHELNCSSDLEVDDIRCPNIAEKDVSDEEIEAEELERRMWKDRIKLKRLKERQKLAIQQAAEKQKPRQSSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSSDNIRAWWKEKVKFDKNGPAAISKYEADCLAMSEADNSRNGNSQSILQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPTGNEDWWSQLNLPHGQSPPYKKPHDLKKMWKVGVLTAVIKHMSPNIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREEALIRQPSSDNGTSGVTGMLPGVPAENKQAATSSASNYDVDGTDDGIGSVSSKEDRRIQIVETEPPVNSRRVRKPVQDRDQSKQRPRKIRVTSRTVDKPPAQSDNEVLHAEPRSKGLNINQTGAEVGRIQIHGNEQSNETDSAARPLEKELEVPAQLPAPEFDHYSYLHTNNLISTESIYTSGRPIHYPELQNPDMQHEPTYNLYNPAAAGYDPSHRQQLHPGNNSEGRPEIDAVHAQAVHMKGDEITGGDLQYFGKDAFQNELDRPIDHPFFGSPLSSMSLDFGGLNSPFHLDDFLGDDEMIQYFGA 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00438 594 MobiDBLite consensus disorder prediction 291 395 - -
Vimu4g00438 594 Coils Coil 39 59 - -
Vimu4g00438 594 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 16 581 IPR006957 GO:0003700|GO:0005634
Vimu4g00438 594 FunFam Ethylene insensitive 3-like 1 161 297 - -
Vimu4g00438 594 SUPERFAMILY DNA-binding domain of EIN3-like 168 291 IPR023278 GO:0003700|GO:0005634
Vimu4g00438 594 MobiDBLite consensus disorder prediction 334 380 - -
Vimu4g00438 594 MobiDBLite consensus disorder prediction 64 85 - -
Vimu4g00438 594 Gene3D - 74 150 IPR023278 GO:0003700|GO:0005634
Vimu4g00438 594 Gene3D - 159 298 IPR023278 GO:0003700|GO:0005634
Vimu4g00438 594 FunFam Ethylene insensitive 3-like 1 74 152 - -
Vimu4g00438 594 Pfam Ethylene insensitive 3 40 287 IPR047091 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00438 Vimu-Chr4 3185339 3187123 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g00438 18 577 EIL Transcription Factor Family AT1G73730 54.211 0.0 540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Vimu4g00438 EIN3 4.1e-127 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00438 4 3185339 3187123 Vimu4g00438 4 3185339 3187123 ECH