Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00068 ATGGATAAATCAGGGCGTGGTTTCAAGAGCTTCAGAACATTATTGGCTGTGGCTTCTATAACTTTCCCTGTTTTGATCACATTTACTCTCATACACCAGAACTCAGTTTTCGATCTCGTCCATGGATTTAACGATTTGGCTGCAAGAGCCCACAATGCTTCTAATATTGTCTTGAAACAAGGAACTCAAAATGCGATCACTACTAATGTCGTGCACGAAGGAGCTCAAAATGCCTCAATACATGAGTTTCAAAATGCTACAGTTAAAACTGGGGGAGAAAAGGATCATAATGTTATTCCAGACACAGCGCCTGTTGGTCCAAAGAATAATTCATCTGAAGATGGGGAGAATGTTTTGTCCCTATCTACTACCATCACCATTTCTAAAGACAAACTCCTTGATGGGCTTCTGGTTTCATCATTTGATGAAGCATCATGCTTTAGTAGATATCAATCTTACTTGTACCGCAAAAGTTCCTCTCACAAACCTTCTGAATATCTTATCTCCAAGTTACGAAAATATGAACATATTCATCGAAGTTGTGGACCTTCTACCAAATTCTACAACAAAATCATGAGAAAGGGCACAAAATTTAGCAAAAATGATGTTAGTACGAAATGCAAATATCTTGTCTGGACAGCTGCCAATGGATTAGGGAACAGAATAGTAACCTTGGTTTCAGCATTTCTTTATGCTATCCTTACAGATCGTGTTCTCCTTGTCAAATTTGGGACCGATATGTCTGGTCTCTTTTGTGAGCCATTTCCTGATTCCTCGTGGTTATTGCCCAGGAGTTTTCCTTATTGGAAAGATCAGAAGCATATTGAAACATATGAAAACATATTAAATAATTTCAAGGTAAACAGTTCACAGGTACTTTTGCCACCATTTCTTATTCTTAATCTACAGCACAGCCATGACCGTCACAATAATTTTTTTCATTGTGATGGGAGTCAAGATCTTCTTCAAAAAATTTCAGTGCTGATTTTACGGTCAGATCAATACTTTGTCCCTTCTCTTTTTATGATTCCATTGTTTAAAGAAGAACTAAGTAAAATGTTCCCCCAGAAGGACACAGTTTTTCACCATCTTGGACGTTACCTTCTTCACCCATCAAACGAAGCATGGGAAATAATTAGAAAAATTTATGAGGCGCATCTAGCCAAGGCAAATGAGAGGATAGGTCTGCAGATTAGACTTTTTAATACTCATCGCCCACCACATCAAACTGTTATTAACCAAATAGTATCCTGCACCCTTCAGCATAAGTTGCTGCCTGATTTCAACGCACAAAAGTCAGTGGCTTCTCCTCTGAAGAAGACCTCAAAAGTTGTTTTAGTAGCATCTTTATTTTCACAATACGGTGAGAAGCTGAAGACTATGTATCAGGCAAATAGAACTGTGACCAGGGAAGTGATAAGAGTTTATCAGCCCAGTCATGAAGAGCGTCAAAAGTCAAATGATGACATGCACAACATCAAGGCATGGACGGAAATATATTTGCTGAGTTTGTGTGATGCATTGGTTACTAGCACTAAGTCTACTTTTGGTTATGTTGCTCATAGTCTTGGAGGTTTGAAGCCATGGATTTTGCAGAGGGCATATAATGAAACCATCCCAGATCCACCTTGTCGACATGCCAAGTCCATGGAGCCTTGTTTCCATTATCCACCCAAATATGACTGTAGGGCCAATAGCACAGTTGATTTTACTTCCCTTTTTCATCATATGAAGCATTGTGAAGATGTATCTGGTGGATTGAAGCTGGTTCCTGTTATCCACAATGTAGCCTTGTTCTGCGGAAGGGTTGTCTCTGATCAAACCGGTTTCACCATATTGAATGAGTGGTATTGGAGAAAGGCCATTGTAGATATAATTCAATCTGAGAAGCATGGTTTGTCGACAGAAACCCGAACAAGGTATATGCATTATTCAATATCGCTATGGCAAACTTCGATAGTTGAGTCTAGGAATTCTGAAGGTCTGCCAATTTTGCTGCTGCACTATCTCGAGGCATGTAATAATTAG 2028 0.392 MDKSGRGFKSFRTLLAVASITFPVLITFTLIHQNSVFDLVHGFNDLAARAHNASNIVLKQGTQNAITTNVVHEGAQNASIHEFQNATVKTGGEKDHNVIPDTAPVGPKNNSSEDGENVLSLSTTITISKDKLLDGLLVSSFDEASCFSRYQSYLYRKSSSHKPSEYLISKLRKYEHIHRSCGPSTKFYNKIMRKGTKFSKNDVSTKCKYLVWTAANGLGNRIVTLVSAFLYAILTDRVLLVKFGTDMSGLFCEPFPDSSWLLPRSFPYWKDQKHIETYENILNNFKVNSSQVLLPPFLILNLQHSHDRHNNFFHCDGSQDLLQKISVLILRSDQYFVPSLFMIPLFKEELSKMFPQKDTVFHHLGRYLLHPSNEAWEIIRKIYEAHLAKANERIGLQIRLFNTHRPPHQTVINQIVSCTLQHKLLPDFNAQKSVASPLKKTSKVVLVASLFSQYGEKLKTMYQANRTVTREVIRVYQPSHEERQKSNDDMHNIKAWTEIYLLSLCDALVTSTKSTFGYVAHSLGGLKPWILQRAYNETIPDPPCRHAKSMEPCFHYPPKYDCRANSTVDFTSLFHHMKHCEDVSGGLKLVPVIHNVALFCGRVVSDQTGFTILNEWYWRKAIVDIIQSEKHGLSTETRTRYMHYSISLWQTSIVESRNSEGLPILLLHYLEACNN 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00068 675 MobiDBLite consensus disorder prediction 91 115 - -
Vimu4g00068 675 PANTHER FUCOSYLTRANSFERASE 2-RELATED 57 590 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vimu4g00068 675 Gene3D - 204 256 - -
Vimu4g00068 675 Pfam Xyloglucan fucosyltransferase 127 563 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vimu4g00068 675 FunFam Galactoside 2-alpha-L-fucosyltransferase 205 256 - -
Vimu4g00068 675 Gene3D - 377 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00068 Vimu-Chr4 371152 374233 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g00068 127 590 Xyloglucan Fucosyltransferase1 AT2G03220 51.586 1.42e-164 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00068 K13681 - gmx:100799776 931.398