Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00066 ATGGCTAATAGGGAGATTTGGAAGAATTTCAGAATATTGGTAGTTGGAATTTCCGTAACCTTTTCCATTTTAATCGTATTTTTTGCCATATACCAAAAGTCAATCTTTGATATCCCCAGAGATTATAATGTATTGATTGAAAGAATTCAGGATACAACTACTAATATACAAAAGACTCCAAATACTATTACAATTCAAGACGGGGAAGAAAATAATTCTAATATTAGTGAACCAGTTGCAGCTAAAGATTCAAAGAATAATGCATTTAAAGATAGGAAGAATAATTTATCTCTATCTACTACTATTAATGACAAACTACTCAATGGACTTCTAAGTTCCTCGTTCGAAGAAGCATCATGCATTAGTAGGTTTCAGTCTTATTTGTATCAGAAAGTTTCTCCTTACAAACCTTCTAAATATTTGATATCCAAGTTACGAAATTATGAACATCTTCATCAAAGGTGTGGACCTTATACTAAATCCTACAATGAAACCATAAAAGAGGGTGCAAAAGTTAGCGGAAATGGTGTTGATTCAAAATGCAAATATTTTATCTGGACAGTTGAAGATGGCTTAGGAAACAGGATGATATCCATGGTTTCAGCATTTCTTTATTCAATCCTTACAGACCGTGTTCTTCTTGTTAGATTTGGTGATGATATGTTGAATCTCTTTTGCGAGCCATTTCCTAATTCTTCATGGTTGTTGCCCAAGAATTCTCCTTATTGGAATGATCTGAAACAATTTCCAACACATAAAATCATCTTTATCGATAACAAGGAAAACAATTCACGAGAGCTTTTGCAACCAGCTCTTGTTATTAATTTAAAGCACACCCATGTTGGTCCTACTAATCGGTTTCATTGTGATAAAAATCAGGATCATTTACAAAAGATTCCTGTGCTCATTCTACAGTCAAATTTATATTTTGTCCCTACTCTTTATATGGTGTCCTCTTTTAGAGAAGACTTTGACAAAATGTTTCCTGACAAAGACACTATTTTTCATCATCTTGGACGCTACCTTTTTCAACCATCAAATGTTGCATGGGAACGAATTCGAAATTTATATGAGCAACACTTGGCTAAGGAAAATGAAAGAATTGGCTTGCAAATCAGAGTATTTAATACTCGTAAAGCACCACAACAAACCATTATCGATGAAATTATATCTTGCACCCATCAAAATAAGTTGCTGCCAAAATTCAATGTTCTTAACTCAATGAGTCCTCCTCCTTTGAGAAATAATACCTCAAAAGTTGTTCTAGTTGTATCTTTATACTCAAAATATGGTGAAGGGTTAAAGAATATATATCAAAACAATACAACTTTGAGTAAGGAAGTAATAAAAGTATATCAGCCAAGTCATGAAGAGCATCAGAATTCACGTAATAGCATGCACAACATTAAGGCATGGACTGATATATATTTGTTGAGTTTGTGCAATGCATTGGTTACAAGCACCTTCTCTACGTTTGGATATGTTGCTAGTAGTCTTGCAGGTTTAAAGCCATTGATTTTGAAAAATGTATATGGTAAAAATGTTCCGAATCCACCTTGTGAGCAAGTCAAGTATATGGAACCTTGTTTCCTTGATCCTCCCATTCATGATTGTAGGAGCAATACCAAAATCGATTATACTTCTGTATTTCTCAATATGAAACACTGCGAAGATCATGCAAAAGGAGTTTGCGAACGAGTTCGGATTTCACGAGTTGACCCAGTTGAGGCGCCGGTTCAGCAGAGAGGAACCGGATCTTCGGATTCCGGATTCAGATCTCGAGGCTTTGCTGGCGGCGCCGAAGAAGGAAGCGGAAATGAGACGCTGGATTCTGCTTTTTATTTAGGTGCAAAGAATAATAATACATTTGAAGATGAAAAGAATGATGAGAAGTTGTATGGTGGACTTTTAGTTTCTTCATTTGATGAATCATCGTGCGTTAGTAGGTTTCGATCTTATTTGTATCGAAAAACTACTCTTTACAAACCTTCTGAATATTTGATATTCAAGCTACGAAACTATGAAAATCTTCATCGAAATTGTGGACCATTTTCTAAGTCCTACAATGAAACCATGAAAGATGGTGCAAACTTTAGCAAAAATGGTGTTGATTCGAAGTGCAAATATCTTATATGGACAGCTATAGAAGGCTTGGGAAACAGGATGATATCCTTGGTTTCGACATTTCTTTATGCAATCTTCACAGATCGTGTTCTTCTTGTTAGATTTGACAATGACATGATGGATCTCTTTTGTGAGCCATTTCCAGATTCATCATGGTTGTTGCCCAAGAATTCTACTTATTGGAATGATTTGAGACAATTTAAAACATGGGAAAACATGTTTGAGAATAGCAATGGAAACGATCCACTTACAGCTCTTTATCTTGATTTGATGAACGACAATGTTCGTGTTACTAATCGTTTTCATTGTGATCAAAATCAGGTTCTTCTACAAAATATTCCTGTGTTGATTTTACGATCAAATGAGTATTTTGCCCCTTCTCTTTATTTGACATACTCGTTTAGACAAGACTTCAACAGAATGTTTCCTGACAAAGACACTACTTTTCACCTTCTAGGACGCTATCTTTTCCACCCATCAAATGTAGTATGGGAACGAATTCAGAATGTATATGAGGCACACCTAGCCAAAGAAAATGAAAGAATTGGCTTGCAGATTAGGATATATAATACTCGTCAAACCCCAGAAGAAACAATTGTCAATGAAACTATATCTTGCCTCCAACAAAATACATTGTTGTCAAAATTCGACATGCAAAACTCAATGAGTCCTCCTTTGGAAAAGAATACATCAAAAGTTGTTCTAGTGGTATCTTTATACTCAAAATATGGTGAAAGACTAAAGAGTATATATGAAAGTAATACAAGTTTAAGCCGGGAAGTAGTAAAAGTGTATCAACCAAGTCATGAAGAGCATCAAAATTCAGGTGATAACATGCACAACATAAAGGCATGGAGTGAAATATATTTGTTGGGTTTGTGTGATGCATTGATTACAAGCCCTACATCCACTTTTGGGTATGTTGCTCACAGTCTTGGAGGAATGAAACCATTGGTTTTGCAAAGTATATCTGGGAAAAGTATCCCAAATGTACCTTGTCAACGACTCAAGTATATGGAACCTTGTTTCCATGATCCTCCTAATTTTGATTATAAAGATCCAAAGAATAATACATTTGAAGCTATAAAAGATTATTTGTCTCTATCTACTATCACTGGTAATGATAAGTTGTTTGGTGGACTTTTAGTTTCCTCATTTGATGAATCATCATGCATTAGTAGGTTTCAATCTTATTTGTATCGAAAAGCTTCTCCTCACAGGCCTTCTAAGTATTTGATATCCAAGTTACGAAACTATGAACATCTTCATCAAAGATGCAGGCCTTATACTAAATTCTACAATGAAACCATGGAAAAGGGTGCAAAATATAGCAAAAATTATGCTAATTTAAGGTGCAAATATCTTGTTTGGATAGCCTCAGATGGCTTAGGGAACAGGATGATATCCTTGGTGTCAACGTTTCTCTATGCAATCCTTACAAATCGTGTTCTTCTTGTTAGATTTGACGTTGATATGTTAAATCTCTTTTGTGAGCCATTTTTTGATTCCTCGTGGTTGTTGCCCAAGAATTCCCCTTATTGGAATGATCTAAAACAATTTCAAACACATGAAATCCTATCTATGAATAATAAGGGAAACAATTCACTTGAGTTTGTGCCACCAGTTCTTGTTCTTGATTTAACACATACCCATGTTGGTCATACTAATCTTTTTCATTGTGATCAAAATCAAGATCTTTTGCAAAAAGTTCATGTAATGATCTTACGGTCAAATCAATATTTTGTCCCTTCTCTTTTCATGATATCTTCTTTTAGACAAGACTTGAACAAAATGTTCCCCGACAAAGACACGATTTTTCACCATCTTGGACGATACCTTTTTCACCCATCGAATAAGGTTTGGGAACGGATTCAAAAATTATATGAGGCAAACTTAGCCAAGGAAAATGAGAAGATTGGCCTACAAGTTAGAGTATTTAATATCCACCATCCACCAACACAAACCATTACCAACGAAATTATATCTTGCGTCCATTTGTTGCCAAATTTCAACGTGCAAAGCTCAACGAGTCCTCCTTTAAAAAATAATACCTCAAAAGTTGTTTTAGTAGTATCTTTATACTCTCAATATGGTGAGAAGCTAAAGAGTATATATGAAAGTAATACAAGTTTGAGTACGGAAGTAATAAAAGTGTATCAACCAAGTCATGAAGAGCAGCAAAATTCAAATGATGACATGCACAACATTAAGGCATGGACTGAAATATATTTGTTGAGTTTGTGTGATACATTAGTTACAAGCTCGATGTCCACTTTTGGATATGTTGCTCATAGTCTTGGAGGATTGAAGCCATGGATTTTGCAACCTATATATGGGGAAACTGTGCCAGATCCACCTTGTCGACGAGCCAAGTACATGGAGCCTTGTTTTCATTATCCTCCAAAATATGCTTGTAGAACTAATGTCACTGTGGATTTTACTTCTCTTTTTCATCATATTACACATTGTGAAGATGTATCTAGTGGAATTAAGGTGATTAATGTTTATGACTAG 4638 0.3502 MANREIWKNFRILVVGISVTFSILIVFFAIYQKSIFDIPRDYNVLIERIQDTTTNIQKTPNTITIQDGEENNSNISEPVAAKDSKNNAFKDRKNNLSLSTTINDKLLNGLLSSSFEEASCISRFQSYLYQKVSPYKPSKYLISKLRNYEHLHQRCGPYTKSYNETIKEGAKVSGNGVDSKCKYFIWTVEDGLGNRMISMVSAFLYSILTDRVLLVRFGDDMLNLFCEPFPNSSWLLPKNSPYWNDLKQFPTHKIIFIDNKENNSRELLQPALVINLKHTHVGPTNRFHCDKNQDHLQKIPVLILQSNLYFVPTLYMVSSFREDFDKMFPDKDTIFHHLGRYLFQPSNVAWERIRNLYEQHLAKENERIGLQIRVFNTRKAPQQTIIDEIISCTHQNKLLPKFNVLNSMSPPPLRNNTSKVVLVVSLYSKYGEGLKNIYQNNTTLSKEVIKVYQPSHEEHQNSRNSMHNIKAWTDIYLLSLCNALVTSTFSTFGYVASSLAGLKPLILKNVYGKNVPNPPCEQVKYMEPCFLDPPIHDCRSNTKIDYTSVFLNMKHCEDHAKGVCERVRISRVDPVEAPVQQRGTGSSDSGFRSRGFAGGAEEGSGNETLDSAFYLGAKNNNTFEDEKNDEKLYGGLLVSSFDESSCVSRFRSYLYRKTTLYKPSEYLIFKLRNYENLHRNCGPFSKSYNETMKDGANFSKNGVDSKCKYLIWTAIEGLGNRMISLVSTFLYAIFTDRVLLVRFDNDMMDLFCEPFPDSSWLLPKNSTYWNDLRQFKTWENMFENSNGNDPLTALYLDLMNDNVRVTNRFHCDQNQVLLQNIPVLILRSNEYFAPSLYLTYSFRQDFNRMFPDKDTTFHLLGRYLFHPSNVVWERIQNVYEAHLAKENERIGLQIRIYNTRQTPEETIVNETISCLQQNTLLSKFDMQNSMSPPLEKNTSKVVLVVSLYSKYGERLKSIYESNTSLSREVVKVYQPSHEEHQNSGDNMHNIKAWSEIYLLGLCDALITSPTSTFGYVAHSLGGMKPLVLQSISGKSIPNVPCQRLKYMEPCFHDPPNFDYKDPKNNTFEAIKDYLSLSTITGNDKLFGGLLVSSFDESSCISRFQSYLYRKASPHRPSKYLISKLRNYEHLHQRCRPYTKFYNETMEKGAKYSKNYANLRCKYLVWIASDGLGNRMISLVSTFLYAILTNRVLLVRFDVDMLNLFCEPFFDSSWLLPKNSPYWNDLKQFQTHEILSMNNKGNNSLEFVPPVLVLDLTHTHVGHTNLFHCDQNQDLLQKVHVMILRSNQYFVPSLFMISSFRQDLNKMFPDKDTIFHHLGRYLFHPSNKVWERIQKLYEANLAKENEKIGLQVRVFNIHHPPTQTITNEIISCVHLLPNFNVQSSTSPPLKNNTSKVVLVVSLYSQYGEKLKSIYESNTSLSTEVIKVYQPSHEEQQNSNDDMHNIKAWTEIYLLSLCDTLVTSSMSTFGYVAHSLGGLKPWILQPIYGETVPDPPCRRAKYMEPCFHYPPKYACRTNVTVDFTSLFHHITHCEDVSSGIKVINVYD 1545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00066 1545 FunFam Galactoside 2-alpha-L-fucosyltransferase 1158 1209 - -
Vimu4g00066 1545 PANTHER FUCOSYLTRANSFERASE 2-RELATED 1078 1541 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vimu4g00066 1545 MobiDBLite consensus disorder prediction 577 604 - -
Vimu4g00066 1545 FunFam Galactoside 2-alpha-L-fucosyltransferase 705 756 - -
Vimu4g00066 1545 Pfam Xyloglucan fucosyltransferase 99 539 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vimu4g00066 1545 Pfam Xyloglucan fucosyltransferase 1080 1514 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vimu4g00066 1545 Pfam Xyloglucan fucosyltransferase 626 1059 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vimu4g00066 1545 Gene3D - 704 757 - -
Vimu4g00066 1545 Gene3D - 178 233 - -
Vimu4g00066 1545 Gene3D - 1158 1211 - -
Vimu4g00066 1545 Gene3D - 350 510 - -
Vimu4g00066 1545 Gene3D - 871 1030 - -
Vimu4g00066 1545 Gene3D - 1326 1479 - -
Vimu4g00066 1545 FunFam Galactoside 2-alpha-L-fucosyltransferase 179 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00066 Vimu-Chr4 358457 369966 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g00066 100 563 Xyloglucan Fucosyltransferase1 AT2G03220 45.513 3.81e-132 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00066 K13681 - gmx:100814715 729.939