Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03606 ATGGACACCTCGTCGTTTTCGAGCCTCCGCGCCTACCTCCGCGCCCTCTCTCACACCCCCACGCGCCTTGCACGACGCGCCCTCTCTATCTCCACCTCCTACGACGAGATGAGCCACGTCCGCGCCCGCTCCGGCACCACCATGCGCAAGACCCTCCGCTGGTACGACCTCGTCTCCCTTGGCATCGGCGGAATGGTCGGCGCCGGTGTCTTCGTCACCACCGGCCGCGCCACCCGCCTCTACGCTGGCCCCGCCGTACTCCTCTCCTACGCCATTGCCGGCCTCTGCGCCCTCCTCTCCGCCTTCTGCTACACCGAGTTTGCCGTCGACATGCCCGTCGCCGGCGGCGCCTTCAGCTATCTCCGCGTCACCTTCGGTGAATTCGCAGCTTTTATGACCGGCGCGAATCTCGTGGTGGACTACGTGCTTTCCAATGCCGCCGTCGCCCGAGGCTTCACGGCCTACCTCGGCGCCGCAATCGGAATCTCCTCCTCGAAATGGCGGCTAACGGTGCCGTCTTTTCCTAACGGCTTCAACGAAATAGACGTCGTCGCTGTCGCCGTTGTTTTACTCATCACTCTCGTCATCTGCTACAGCACGAGAGAGAGTTCGGTGGTGAACATGATTCTCACGGCGCTGCATATATTGTTCATAGCGTTCGTGATAATGGTAGGATTCTGGAGAGGGAGTTGGAAGAATTTCACCGAACCCGCTAACCCGGAAAACCCCGGCGGATTCTTTCCGCATGGTGCTGCCGGCGTTTTCCAAGGTGCCGCCTTTGTTTACTTGAGTTACATCGGCTACGACGCCGTTTCGACCATGGCAGAGGAAGTGAAGGATCCCGTGAGGGATATTCCGGTTGGAGTGTCCGGTTCCGTCATTCTCGTCACAGTTCTCTACTGTCTCATGGCCGCATCAATGACCAAACTTCTCCCTTACGATATGATCGATGCAGAAGCGCCGTTTTCGGCGGCGTTCAGTGGGAAATCGGACGGTTGGGGATGGGTGTCTCGAGTAATCGGGGTGGGGGCCAGTTTTGGGATACTGACGTCGCTGTTGGTGGCGATGCTGGGTCAGGCTCGTTACATGTGCGTCATCGGTCGCTCTAATGTGGTCCCCTCATGGTTCGCCAGGGTCCACCCAAGGACCTCCACCCCTGTCAACGCCTCCGCTTTCCTTGGTATTTATTTACTTCGAGTTGGTGTTGTTGTGCGATTCTTTGCACTTTGGTTAATAGAAGTCAATGCTGTGTGCCCAACAGGGATCTTCACAGCGGCAATAGCCCTTTTCGCTGATCTTGATGTCCTGCTGAATCTGGTGTCAATTGGCACCCTGTTTGTGTTTTACATGGTGGCAAATGCCGTGATATACAGACGTTATGTGGCAGCGGGGACAAGCAATCCATGGCCTACATTGTCCTTTCTGTGCTCATTTTCCTTTACCGCAATGATGTTCACCCTTATTTGGAAATTTGTACCAACGGGAGGAGCGAAGGCAGGGATGCTGAGTGTCTCTGGTATTATTGCGATTGCAATATTACAACTTTTCCATTGCATGGTCCCTCAAGTTCGAAAGCCAGAATTCTGGGGTGTCCCATTCATGCCCTGGATACCCTCCATATCTATCTTTCTCAATGTGTTTCTGTTGGGATCCCTGGATGGGCCATCCTATGTTCGTTTTGCCTTCTTTTCGGCTGTTGCCGTGCTTTTCTATGTCTTTTACAGTGTCCATGCTAGCTTTGATGCTGAAGGAGATGGTTCTTTCACTGCAAAAAATGGAGAAATCCACGTGGACTCCAAGGGAATTGAGGACCAAACTTTCAAAGTATAG 1830 0.5437 MDTSSFSSLRAYLRALSHTPTRLARRALSISTSYDEMSHVRARSGTTMRKTLRWYDLVSLGIGGMVGAGVFVTTGRATRLYAGPAVLLSYAIAGLCALLSAFCYTEFAVDMPVAGGAFSYLRVTFGEFAAFMTGANLVVDYVLSNAAVARGFTAYLGAAIGISSSKWRLTVPSFPNGFNEIDVVAVAVVLLITLVICYSTRESSVVNMILTALHILFIAFVIMVGFWRGSWKNFTEPANPENPGGFFPHGAAGVFQGAAFVYLSYIGYDAVSTMAEEVKDPVRDIPVGVSGSVILVTVLYCLMAASMTKLLPYDMIDAEAPFSAAFSGKSDGWGWVSRVIGVGASFGILTSLLVAMLGQARYMCVIGRSNVVPSWFARVHPRTSTPVNASAFLGIYLLRVGVVVRFFALWLIEVNAVCPTGIFTAAIALFADLDVLLNLVSIGTLFVFYMVANAVIYRRYVAAGTSNPWPTLSFLCSFSFTAMMFTLIWKFVPTGGAKAGMLSVSGIIAIAILQLFHCMVPQVRKPEFWGVPFMPWIPSISIFLNVFLLGSLDGPSYVRFAFFSAVAVLFYVFYSVHASFDAEGDGSFTAKNGEIHVDSKGIEDQTFKV 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03606 609 Pfam C-terminus of AA_permease 529 579 IPR029485 -
Vimu3g03606 609 PIRSF AA_transporter 35 526 - -
Vimu3g03606 609 PIRSF AA_transporter 517 595 - -
Vimu3g03606 609 Gene3D Amino acid/polyamine transporter I 47 517 - -
Vimu3g03606 609 Pfam Amino acid permease 53 510 IPR002293 GO:0016020|GO:0022857|GO:0055085
Vimu3g03606 609 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 27 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03606 Vimu-Chr3 48809118 48813234 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g03606 139 594 Organic Solute Cotransporters AT3G10600 69.737 0.0 645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03606 3 48809118 48813234 Vimu3g03606 3 48809118 48813234 ECH