Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03578 ATGCCCGAGATGGACGAGGGCGAGGTTATAGATCAACCTCTGACGGCCATAGCAGAGGCGTTTGAAGAGCTGTCGAAGTGGATGAAGGAGAATAGCGGCGGCCACCACATTCGCCTCGACACTTTCTGCGAGGTCGCCTCTCTCGTCTCCGTTCTCTTCCGTTGTCTCGGCCTCGCTTTCAAATTTGCTGAATTGGAATACGTCGCCAAGCTAGAAGGACTATTGGAAGCATCAAAGACATGTCCCACTCTACAGGATATTCTTGAAGTTGATGTTGGCAATGATACAGTGAAAACATCTGGAAGCTATTCCCGTAATCTGCGTAGAGTTCGGCAGGGTCTTGATCTCGTCAGAGCTATATTCGAACAACTTTTATCTACTGAAGATTCCTCTCTAAAAGACGTGGCTTCAACAGCTTATGGGCAGGTATGCGCACCATACCACACATGGGCGGTACGAACAGCTGTGTACGCTGGGATGTATACACTTCCAACCAGAGAACAACTTTTGATGAAGCTCAATGAAACAGAGCAATCAGCCGAGAAAAAGATGAAAAGGTACATTGCTGCCTCACTTCCGATTATAGAATACATTGATAGTCTGTACATTTCTCGAAATATTACGTTGGACTGGTGA 636 0.467 MPEMDEGEVIDQPLTAIAEAFEELSKWMKENSGGHHIRLDTFCEVASLVSVLFRCLGLAFKFAELEYVAKLEGLLEASKTCPTLQDILEVDVGNDTVKTSGSYSRNLRRVRQGLDLVRAIFEQLLSTEDSSLKDVASTAYGQVCAPYHTWAVRTAVYAGMYTLPTREQLLMKLNETEQSAEKKMKRYIAASLPIIEYIDSLYISRNITLDW 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03578 211 Coils Coil 166 190 - -
Vimu3g03578 211 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 11 201 IPR014830 GO:0005737|GO:0120009|GO:0120013
Vimu3g03578 211 SUPERFAMILY Glycolipid transfer protein, GLTP 31 210 IPR036497 -
Vimu3g03578 211 FunFam Accelerated cell death 11 5 211 - -
Vimu3g03578 211 Pfam Glycolipid transfer protein (GLTP) 37 175 IPR014830 GO:0005737|GO:0120009|GO:0120013
Vimu3g03578 211 Gene3D Glycolipid transfer protein 6 211 IPR036497 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03578 Vimu-Chr3 48587687 48590979 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g03578 10 211 Acyl Lipid Metabolism Gene Families AT4G39670 65.049 2.56e-98 283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03578 3 48587687 48590979 Vimu3g03578 3 48587687 48590979 ECH