Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03563 ATGGAAATGTCCGAGGCACTCCGATGTCGATCACACAGCTTCTCCCTCTTCCCACGTGCACCCATCTCTTCCAGAGAGCACCCTCACAAGTTGATGCCCATTTCACCAAAATTCAGTTCAAACAGAAGGCTGTCGGTGACAACGGCGAAGAAAAAGTCAAGCATCGAAGGTGTGAGCGAAGAGTTGACCGCCATAGCCTCTCTGAACCTTGACTTCGCACCCTCGCGGAGACGGGTTCGTTCAGCTTTCACCGAGGTGCACCAGCAGCTGGACCATTTCTTGTTCAAGGCTGCTCCTACTGGGATCAAAACTGAGGAATGGTACGAAAGGAACTCCAGGGGATTGGAAATTTTCTGCAAAAGCTGGATGCCTGAATCTGGCGTTCCACTCAAGGCTGCTTTGTGTTTTTGTCATGGATATGGCAGCACTTGCACTTTTTTCTTTGAAGGTATTGCCAAAAGAATAGCTGCTTTTGGGTATGGTGTTTATGCTATGGACTATCCAGGTTTTGGTCTATCTGATGGATTACACGGTTATATACCAGATTTTGATGATTTGGTTAATGACGTTATAGAACATTATTCAAAAATCAAAGACAGGCCTGAGGTGAGTGGGTTGCCTCGATATATTATGGGGCAGTCTATGGGTGGAGCAATTGCTCTTAAGGTACATTTGAAGGAACCAAACACTTGGGATGGAGTAATCCTTGTTGCACCTATGTGTAAAATCGCAGAGGGTATGCTACCGCCAACTGCAGTTTTGAAGGTATTAAGTATTCTGTCTAAAGTGATGCCAAAGGCAAAGCTGTTCCCACACAAAGATATATCTGAGCTAACTTTCCGAGAACCTCGCAAGAGAAAAGTGGCTGGTTACAATGTTATTTCTTATGATGATCCAACACGATTGAAAACTGGCATGGAGCTTCTAAGTGCCACTCAAGAAATCGAGTCACAATTACACAAGGTTTCAGCTCCCTTATTGATTCTTCATGGGGCAGCAGATAAGGTGACAGATCCATTAGTGAGCCAATTTCTTTATGAGAAAGCTTCTAGCAAGGATAAGACACTAAAGATCTATGAAGGAGGTTACCACGGTATCTTGGAAGGAGAACCTGATGACAGAATTTCTGCTGTCCATAATGACATTATCTCATGGCTTGATTCTAGGTGCTAA 1173 0.4433 MEMSEALRCRSHSFSLFPRAPISSREHPHKLMPISPKFSSNRRLSVTTAKKKSSIEGVSEELTAIASLNLDFAPSRRRVRSAFTEVHQQLDHFLFKAAPTGIKTEEWYERNSRGLEIFCKSWMPESGVPLKAALCFCHGYGSTCTFFFEGIAKRIAAFGYGVYAMDYPGFGLSDGLHGYIPDFDDLVNDVIEHYSKIKDRPEVSGLPRYIMGQSMGGAIALKVHLKEPNTWDGVILVAPMCKIAEGMLPPTAVLKVLSILSKVMPKAKLFPHKDISELTFREPRKRKVAGYNVISYDDPTRLKTGMELLSATQEIESQLHKVSAPLLILHGAADKVTDPLVSQFLYEKASSKDKTLKIYEGGYHGILEGEPDDRISAVHNDIISWLDSRC 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03563 390 PANTHER PHOSPHOLIPASE-RELATED 85 389 - -
Vimu3g03563 390 FunFam Alpha/beta-Hydrolases superfamily protein 100 390 - -
Vimu3g03563 390 PRINTS Alpha/beta hydrolase fold signature 159 174 IPR000073 -
Vimu3g03563 390 PRINTS Alpha/beta hydrolase fold signature 210 223 IPR000073 -
Vimu3g03563 390 PRINTS Alpha/beta hydrolase fold signature 326 340 IPR000073 -
Vimu3g03563 390 SUPERFAMILY alpha/beta-Hydrolases 85 388 IPR029058 -
Vimu3g03563 390 Pfam Serine aminopeptidase, S33 131 371 IPR022742 -
Vimu3g03563 390 Gene3D alpha/beta hydrolase 99 390 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03563 Vimu-Chr3 48402995 48405908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g03563 19 389 Acyl Lipid Metabolism Gene Families AT1G77420 61.436 1.36e-173 487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03563 3 48402995 48405908 Vimu3g03563 3 48402995 48405908 ECH