Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03559 ATGAAGAAGTGCTACAAAATCCAGTTATTGGCCACACTTTCATTCATTCTTTTGCTTCCAAACACCAAAGGCTGGGGAGAAGATGGCCACGCCATAGTTTGTAGGATTGCTCAGGTCACCAATGACTTTCCTTCTTCTTCTCGCCTCAGCGATTCAGCAGCAGATGCTGTGAAAAATCTGCTGCCAAAATATGCACAAAACGACTTGGGGAGCGTGTGTTCATGGGCTGATCGTGTCAGGTTTTATTTGCACTGGTCTTCTGCATTGCACTTTGCTGATACGCCAGACAAGCTTTGCAATTATCATTTTGATCAGTTGTCTGAAAATTCAGGGGATTGCAAGGATCAGGATGGTGAGAAGGGAAGATGTGTTGTGGGAGCGATTAAGAATTACACAGACCAGCTCCTGGGCTATGGCAAAGACACTCAATATAACCTCACACAAGCTCTTCTGTTCCTCTCTCATTTTATGGGAGATGTACATCAGCCTCTACATGTGGGATTTACCTCTGACAAAGGAGGCAATTTAATTAACATTCACTGGTACAGAAGGAAGCAAAATCTTCACCATGTTTGGGATGTCAACATAATTGAGACAGCCGAAGAAAGATTCTATGACTCAGACATAAACGGCTTCACCAAAGCCATTCAAGAGAATATAACGAAAACATGGTCTGATCAAGTACGCGGATGGGAAACCTGCAATTCTAAGGAAACTACTTGCCCAGATATATATGCTTCTGAAGGCATTGAAGCAGCCTGCAAATGGGCATATAAAGATGCTCCTGAAGGTTCAGTGCTAGAAGACGATTACTTTCTGTCACGTTTGCCAGAGGTCAGTTTGCGATTAGCTCAAGGAGGAGTTCGATTGGCTGCAACTCTCAATCGTATTTTTGGCTGA 900 0.4356 MKKCYKIQLLATLSFILLLPNTKGWGEDGHAIVCRIAQVTNDFPSSSRLSDSAADAVKNLLPKYAQNDLGSVCSWADRVRFYLHWSSALHFADTPDKLCNYHFDQLSENSGDCKDQDGEKGRCVVGAIKNYTDQLLGYGKDTQYNLTQALLFLSHFMGDVHQPLHVGFTSDKGGNLINIHWYRRKQNLHHVWDVNIIETAEERFYDSDINGFTKAIQENITKTWSDQVRGWETCNSKETTCPDIYASEGIEAACKWAYKDAPEGSVLEDDYFLSRLPEVSLRLAQGGVRLAATLNRIFG 299
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03559 299 Gene3D P1 Nuclease 25 299 IPR008947 GO:0016788
Vimu3g03559 299 PANTHER ENDONUCLEASE 4 9 298 IPR003154 GO:0003676|GO:0004519|GO:0006308
Vimu3g03559 299 Pfam S1/P1 Nuclease 25 298 IPR003154 GO:0003676|GO:0004519|GO:0006308
Vimu3g03559 299 SUPERFAMILY Phospholipase C/P1 nuclease 25 297 IPR008947 GO:0016788
Vimu3g03559 299 FunFam Endonuclease 2 25 299 - -
Vimu3g03559 299 CDD S1-P1_nuclease 25 298 IPR003154 GO:0003676|GO:0004519|GO:0006308
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vimu3g03559 Vimu-Chr3 48348097 48349946 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03559 3 48348097 48349946 Vimu3g03559 3 48348097 48349946 ECH