Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03511 ATGTTATCAAAATTGTTAAGCATGTCGAAAGCCATGTCCATGTCCATGTCTATGTCTATGTCTATGTCCTTCCAATCTGACAAGCACGAAGTTCTTTGCAGAGGCTTTTCCACCTTCACCTCCCTCCCACGCGCCACCGCGCCCTTCCGTCTCAGGGCTTTCTCCACCACCGTCACCGATAAGCCCTCGGTTTGCACAGCCGACGAACTCCATTATGTCTCTCTCTCCAATTCCGATTGGAAACTCGCTCTTTGGCGCTACAACCCTTCGCCTCTCGCACCTCCGAGGAATCATCCTCTGTTGCTCTTGTCGGGCGTGGGAACTAACGCCATTGGATATGACCTTTCACCCGAGTCATCATTTGCACGTTACATGTCTGGTCAGGGATTTGAAACTTGGATTCTTGAAGTACGAGGAGCTGGGTTGAGTCTTCAGGGTTCAAATTCTAAAGATATTGAACAATCTGCTAATGCAATGTCTGAGAAGATGGAAGCTGCTTCAGAAATTGCTACAGCTACCAACGGAGCCATGACTTCAAACAAAGAATTGAATAACATCTCTTGCACCGTGTCTGAACCTCAGATTCCTCCTGTCTTAAACGGGGTAGAAACTGGGAATGTGGCCATCAAAGGTGACCTATCTAGGCTGGCTACTGTTTGGGATGAATCAAAGTTGGTGGCAAGATTGACCGAGACTTTTATGTTTTTGTCAGAAAGAGTCTCTGGGTTTCTGAGTGAAAGTCAATCAAGGGTAATGTTTTCCAAATTTCTAGATCAGATTTCAAAACTTCTGGTGGATTCTCCACTATACGAACAATTCAATGACGTAAGGGGAAAGCTTTCAACTTTGTTTGAAACAGAGGAAAACTCTGGTATTACTAGTCAAATAACTGATCTGAGTCAAAGACTAGTAAATATTATTGAGGAAGGTCAGCTATCTGTTTCTCCTCCATTATATGATCTACAAGCTCGCTTTACTTCTACAATAGAAGATTTTCAGAAGCAACTTGACTTGATTGTGAAGTATGATTGGGACTTCGATAATTACTTGGAAGAAGATATTCCTGCAGCGATAGAATACATAGTGAAACAAAGCATGCCTAAAGATGGAAAATTGCTTGCAATTGGACACTCCATGGGTGGTATCTTGCTTTACTCCATGTTGTCACGATTCGGTTCTGAAGGAAAAGAACCAAATTTGGCTGCAGTGGTCACACTGGCATCATCTTTGGATTACACATCATCCAAATCAGCTCTGAAATTACTCTTACCCTTAGCAGATCCTGCCCAGGCCCTCAATGTCCCTGTTGTTCCTTTGGGGGCATTGCTGGCAGCAGCTTATCCTCTTTCTTCTCGTCCACCGTATGTATTGTCACGGTTAAATACTTTGATTTCAGCTGAGGACATGATGCATCCAAATTTATTAAAGAGACTTGTTTTAAATAACTTCTGTGAGTATTTCTATCCATTAGAAATATAA 1479 0.428 MLSKLLSMSKAMSMSMSMSMSMSFQSDKHEVLCRGFSTFTSLPRATAPFRLRAFSTTVTDKPSVCTADELHYVSLSNSDWKLALWRYNPSPLAPPRNHPLLLLSGVGTNAIGYDLSPESSFARYMSGQGFETWILEVRGAGLSLQGSNSKDIEQSANAMSEKMEAASEIATATNGAMTSNKELNNISCTVSEPQIPPVLNGVETGNVAIKGDLSRLATVWDESKLVARLTETFMFLSERVSGFLSESQSRVMFSKFLDQISKLLVDSPLYEQFNDVRGKLSTLFETEENSGITSQITDLSQRLVNIIEEGQLSVSPPLYDLQARFTSTIEDFQKQLDLIVKYDWDFDNYLEEDIPAAIEYIVKQSMPKDGKLLAIGHSMGGILLYSMLSRFGSEGKEPNLAAVVTLASSLDYTSSKSALKLLLPLADPAQALNVPVVPLGALLAAAYPLSSRPPYVLSRLNTLISAEDMMHPNLLKRLVLNNFCEYFYPLEI 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03511 492 Gene3D alpha/beta hydrolase 333 490 IPR029058 -
Vimu3g03511 492 PANTHER LYSOSOMAL ACID LIPASE-RELATED 64 475 - -
Vimu3g03511 492 Gene3D alpha/beta hydrolase 69 162 IPR029058 -
Vimu3g03511 492 PIRSF UCP031088_abhydr 3 488 IPR016969 -
Vimu3g03511 492 SUPERFAMILY alpha/beta-Hydrolases 72 437 IPR029058 -
Vimu3g03511 492 ProSitePatterns Prolyl endopeptidase family serine active site. 353 383 IPR002471 GO:0004252|GO:0006508
Vimu3g03511 492 FunFam Alpha/beta hydrolase family protein 69 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03511 Vimu-Chr3 47993561 47997162 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03511 3 47993561 47997162 Vimu3g03511 3 47993561 47997162 ECH