Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03485 ATGGAAAAGGGTCTATTAGAGAAGGAGAGAGAGAGCGATTCAGGCATAATAAGATGGAGTATGTTTGGTGAAGAGGTGAAAAGGGTCGGTTATTTGGCAGGTCCTATGGTTACCGTGACTTTGTCACAGTATTTTCTACAAATGATATCATTGATGATGGTTGGTCACTTGGGTAAGCTTGCTCTCTCCAGCACAGCCATTGCCATCTCTATCTGTGCTGTATCTGGCTTCAGTGTCATCTTTGGAATGTCATGTGCACTGGAAACTCAATGTGGGCAAGCATATGGAGCACAGCAATACAGAAAATTTGGTGTTCAAATTTACACTGCAATTGTCTCGCTTACTTTATCTTGTCTTCCTCTGAGTCTTTTGTGGGTGTACTTGGGGAAGCTGCTCATTATACTTGGCCAAGACCCTTTGATTTCACAAGAAGCTGGAAAATTTGCTTTGTGCATGATCCCTGCTCTCTTTGCTTATGCAGCACTTCAGACTTTGGTTCGATTCTTTTTGATGCAAAGCCTGATCAGTCCCCTTTTCATAAGTTCCTCCATTACACTTTTCTTCCATGTGGCTTTCAGTTGGTTAATGGTTTTTAAATCTGGACTCGGTAACTTAGGAGCAGCACTTTCTATCAGCACTTCATACTGGCTGAATGTGATTTTACTTGGATTATATATGAAATTCTCTACTCAATGTGAAAAGACTCGAGTCCCAATTTCAATGGAACTATTCCATGGGATTGGAGAATTCATCCGCTATGCCATTCCTTCGGCTGGAATGATATGCCTTGAATGGTGGTCATTTGAGCTAGTAATCTTGCTTTCTGGTCTTCTACCAAATCCAGAACTAGAAACTTCAGTCTTATCCATATGCACTAGAATTTCAAATGCATTAGGAGCTGGAAGTCCACAATCAGCACGAGTGTGTGTTTATGCTGCCATGGCTCTTGCAACTTCCGAGGCCATTCTGATTTTGGGTTATGTATTTAGCAATGAACAGGACGTGGCGGATTATGTCACAAATATGGCTCCTCTCTTGAGTCTTTCTATTATACTTGATTCCTTGCATGCTACCCTCTCAGGTATTGCCAGAGGATGTGGATGGCAGCACTTAGGAGCATATGTAAACCTTGGAGCCTATTATGTTTTTGGAATTCCAACTGCTGCTATATTGAGCTTCTGGTTTCAATTAGGAGGAAAAGGGTTGTGGATAGGAATAATCACTGGCGCATTCTGTCAAACAGTTATGTTATCTCTCATAACAACATGTACAAACTGGGAAGAACAGGCAATTAAAGCAAGGAAAATGATATTTCAGGGAAGTTTTTCTGTAGAAGATGCGTTGGTTTAA 1350 0.4119 MEKGLLEKERESDSGIIRWSMFGEEVKRVGYLAGPMVTVTLSQYFLQMISLMMVGHLGKLALSSTAIAISICAVSGFSVIFGMSCALETQCGQAYGAQQYRKFGVQIYTAIVSLTLSCLPLSLLWVYLGKLLIILGQDPLISQEAGKFALCMIPALFAYAALQTLVRFFLMQSLISPLFISSSITLFFHVAFSWLMVFKSGLGNLGAALSISTSYWLNVILLGLYMKFSTQCEKTRVPISMELFHGIGEFIRYAIPSAGMICLEWWSFELVILLSGLLPNPELETSVLSICTRISNALGAGSPQSARVCVYAAMALATSEAILILGYVFSNEQDVADYVTNMAPLLSLSIILDSLHATLSGIARGCGWQHLGAYVNLGAYYVFGIPTAAILSFWFQLGGKGLWIGIITGAFCQTVMLSLITTCTNWEEQAIKARKMIFQGSFSVEDALV 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03485 449 PANTHER MULTIDRUG RESISTANCE PROTEIN 19 426 - -
Vimu3g03485 449 CDD MATE_eukaryotic 25 432 IPR045069 GO:0042910|GO:1990961
Vimu3g03485 449 Pfam MatE 35 195 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vimu3g03485 449 Pfam MatE 292 389 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03485 Vimu-Chr3 47735732 47738138 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03485 3 47735732 47738138 Vimu3g03485 3 47735732 47738138 ECH
Vimu3g03485 3 47735732 47738138 Vimu8g01611 8 21994980 21996952 ECH