Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03484 ATGGAAAAGGGTCTCTTGGAGAAGAAGGGAGAGGTGAAAGAAGGTGGTTCAGGCGTAATAAGATGGAGTGTGTTTGGTGAAGAGGTGAAAAAGGTTGCTTATTTAGCAGGTCCTATGGTTGCTGTAACTCTGTCACAGTATTTTCTACAAATAATATCAATGATGATGGTTGGTCGCTTGGGTAAGCTTGCTCTCTCCAGCACAGCCATTGCCATCTCTCTCTGTAATGTCTCTGGTCTCAGTGTCATTTTTGGAATGTCGTGTGCCCTGGAAACTCGTTGTGGGCAAGCATATGGAGCACAGCAATACAGAAAATTTTGTGTTCAGATTTACACTGCAATTGTCTCTCTTGCTTTAGTTTGTCTTCCTCTTTCTTTCTTGTGGATGAACATGGGAAACCTCCTCGTTTTACTTGGCCAAGATCGTTTGGTTTCAGTAGAAGCTGGAAAATTTGCTCTGTGCATGATCCCTGCTCTCTTTGCTTATGCAACACTTCAGTCTCTGGTTCGATTCTTTTTGATGCAAAGTTTGATGAGTCCTCTTGTCATAAGTTCCTTCATTACTCTTTGCTTCCATGTGGCATTCAGTTGGTTTATGGTGTTTAAATCGGGACTTGGTAACTTAGGAGCAGCATTTTCTATTGGTACTTCATATTGGCTGAATGTGACTCTACTTGGATTATATATGAAATTCTCTTCTCAATGTGAAAAGACTCGAGCCCCAATTTCAATGGAATTATTCCATGGGATTGGAGAATTCATTCGCTATGCCATTCCTTCAGCTGGAATGATTTGCGCTAGAGTTTCGAATGAATTAGGTGCAGGAAGTCCACAATCAGCAAAAGTATCTGCTTATGCTTCCATGATACTGGGAGCTACCCAGGCCGTTGTGGTGGGGCAGATTTTGGGTTATGTATTCAGCAATGAGCAGGACGTGGTGGATTATGTCTCAGAAATGGCTCCTCTCTTAAGTCTCTCTGTTATACTGGACTGCTTACATGGTACCCTTTCAGGTATTGCCAGAGGATGTGGGTGGCAGCACTTAGGAGCATATGTAAACCTTGGATCCTACTATGTTTTTGGAATTCCAATTGCTGCTATATTGGGTTTCTGGGTCCAATTTAGAGGGAAAGGACTGTGGATTGGAATATTGATTGGTGCCTTTTGTCAAACAGCTATGCTACTTCTCATAACAATGTGTACAAACTGGAAAAAACAGGCAATTGAAGCAAGAGAAAACATTTTTCAGAGAAGTTTCTCTGTAGAAGATGGATTAGCTTAA 1281 0.4169 MEKGLLEKKGEVKEGGSGVIRWSVFGEEVKKVAYLAGPMVAVTLSQYFLQIISMMMVGRLGKLALSSTAIAISLCNVSGLSVIFGMSCALETRCGQAYGAQQYRKFCVQIYTAIVSLALVCLPLSFLWMNMGNLLVLLGQDRLVSVEAGKFALCMIPALFAYATLQSLVRFFLMQSLMSPLVISSFITLCFHVAFSWFMVFKSGLGNLGAAFSIGTSYWLNVTLLGLYMKFSSQCEKTRAPISMELFHGIGEFIRYAIPSAGMICARVSNELGAGSPQSAKVSAYASMILGATQAVVVGQILGYVFSNEQDVVDYVSEMAPLLSLSVILDCLHGTLSGIARGCGWQHLGAYVNLGSYYVFGIPIAAILGFWVQFRGKGLWIGILIGAFCQTAMLLLITMCTNWKKQAIEARENIFQRSFSVEDGLA 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03484 426 PANTHER MULTIDRUG RESISTANCE PROTEIN 22 265 - -
Vimu3g03484 426 CDD MATE_eukaryotic 28 407 IPR045069 GO:0042910|GO:1990961
Vimu3g03484 426 Pfam MatE 38 197 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vimu3g03484 426 Pfam MatE 266 366 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03484 Vimu-Chr3 47731067 47733600 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03484 3 47731067 47733600 Vimu3g03484 3 47731067 47733600 ECH
Vimu3g03484 3 47731067 47733600 Vimu8g01614 8 22004305 22005902 ECH