Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03471 ATGGCATTAGGGCAGGGAAAGGGGAAATTGAGTGATCTTTGTCACCTTCTTCTTTCTTCTTCTTATTTTTCCTCTGCGAGTGAGCGAGTGAAGGAGTGTGTGAATATGAGCAATCCCAAGGAAGAAGAACCGTTTTCTAGAGCTGCAAGAGCAGCAGAAGATCTTTACCATCTTCGAGACACTTATTTTCCACCCAACCCCGATGACAGAATCTCAAAGTTGCAACACGAATCCGATCTCGCTCTTAATCTCCTCGATTCCATTCCCCCAGAACAAAGAAAATCACCTACACAACGTGCAACATTTGAACATCTTAGGGGGAAGATGTTGGATGTTTTTCCTGACTATAGGAAAGAAGCTGAGGACCATCTATCAAAAGCTGTCAAGTTAAACCCATCTCTTGCAGATGCTTGGCTATGTTTAGGAAATTGCATTTGGAAAAAAGGAGATTTAACTGCTGCAAAGAATTGCCTCAGTCTTGCATTAGACAAGGGTCCTAACAAAAAGATTCTTTGTCAACTATCGATGCTTAAAAGAAAAATGTCTCAAGGTGTGGAGAATCAAGCAGAACTGGTTGAAGAAAGCATTCAACATGCCAAGGAAGCAATCACTTTGGATGTCAAGGATGGGAACTCTTGGTCAGCCTATTGGCTCACGAAGTTGTCCCTTAGAAAGGTGGACCATATCTTTAGTCCACCAGTAGCTGGTAGGGCAGTTAACAAATATCTTGAGAACTACCAGAGGGCCCTTAGTGGATTTGAGGCTGCTGCTTTAAAGGATCCTGGTCTCAATGCTGCAGAGGAGGTTCAGAAGATAGTCAGTTTACTTGACAAGGTGGACAATCTTTTGAAGGGACATGTAAGAGCTAAGCGAATGACATCTTTGGCTTCGTCATTGGTTGCTGTTGATTGTAAGCACTTTTCTGTGAGCTTGGCTTCAGTTTGTGTGAAATCGTCATACAGAAGAGTTACCATAGACCTTTTATCAGAGGGTCCAAATAGAGCTCTTGCAGTGGAGGCGAAAATTAAAGAAGGAGATCAACTAACAATGCTTGATCCTTATTTTCGTGATGTTGATTTGTCGTGGAATGAGAAGCATTACCAGTTCAAGTCTATACGCCTGGATTTCTACGAACAAGTACTTGTAAATGGAAAAGCTTTGACTCCTCAGCAAACTGTTCATACGTCAATATATGCTCAACATAAACCCTGA 1212 0.42 MALGQGKGKLSDLCHLLLSSSYFSSASERVKECVNMSNPKEEEPFSRAARAAEDLYHLRDTYFPPNPDDRISKLQHESDLALNLLDSIPPEQRKSPTQRATFEHLRGKMLDVFPDYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLTAAKNCLSLALDKGPNKKILCQLSMLKRKMSQGVENQAELVEESIQHAKEAITLDVKDGNSWSAYWLTKLSLRKVDHIFSPPVAGRAVNKYLENYQRALSGFEAAALKDPGLNAAEEVQKIVSLLDKVDNLLKGHVRAKRMTSLASSLVAVDCKHFSVSLASVCVKSSYRRVTIDLLSEGPNRALAVEAKIKEGDQLTMLDPYFRDVDLSWNEKHYQFKSIRLDFYEQVLVNGKALTPQQTVHTSIYAQHKP 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03471 403 Gene3D - 335 402 IPR038645 -
Vimu3g03471 403 SUPERFAMILY TPR-like 118 262 IPR011990 GO:0005515
Vimu3g03471 403 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 41 363 - -
Vimu3g03471 403 Coils Coil 182 202 - -
Vimu3g03471 403 Pfam Tetratricopeptide repeat protein 5 OB fold domain 338 394 IPR032076 -
Vimu3g03471 403 Gene3D Tetratricopeptide repeat domain 38 225 IPR011990 GO:0005515
Vimu3g03471 403 Gene3D Tetratricopeptide repeat domain 237 286 IPR011990 GO:0005515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03471 3 47639698 47649642 Vimu3g03471 3 47639698 47649642 ECH