Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03447 ATGTATGCCTTATTTCCCTACTTCACAAAGTTACTGATCCACATCCGTTATCTTTTATCAGATCTTTCCCACGTTTTCTCTTCCGTTAGGAGAGACCTGAATTTCATTGAGCACACTGGTGACCTTGGATGGAAAGAGAGCGATAGATTCCAGCCTATTGTAGTTGACCCGGGGTTATATTTAGCAAGAAAGAGTCAAATTTTTCAAGCTACAGAAAAGAGGGCAACTCCTAACGCATTCAAAATTTTCACAGGCAAATCTTTTATCTCATGCCTTCTGTGCAGCACAATACATGTTTTACAGGGTTCGCCATGGGTAATCTTGAGCAGGCCCTTTCTGGAGTTCTGCATTTTTGGTTGGGACAATTTACCTCGAACCCTGCTGATGTACTTTACAAATGTGAAGTTATCTCAAGAAGGCTACTTTCACTCAGTCATTTGCAATGCGCCAGAGTTCAAGAACACAACAGTAAATGGGAACTTACGATATATAGTCTGGGACGATCCTCCAAAGATGGAACCACTCTTCCTTAATGCTTCCGATTACAATCAGATGGCAGACAGTGGAGCTGCTTTTGCAAGACAGTTTCAATTTAATAATCCTGTATTGGACATGATTGATGAGAAGATTCTCCATCGTGGTAGCCATCGAACTACTCCAGGAATGTGGTGCACTGGGCGGAGGAGCTGGTGGGCGGATCCATGCTCCCAATGGGGTGATGTCAATATTGTAAAACCAGGTCCTCAGGCTAAGAAGCTTCAAGGGTCCGTTTCTGACCTTCTTGATGGCTGGAACTCACAGACCAATCAATGTCGGTGA 819 0.4371 MYALFPYFTKLLIHIRYLLSDLSHVFSSVRRDLNFIEHTGDLGWKESDRFQPIVVDPGLYLARKSQIFQATEKRATPNAFKIFTGKSFISCLLCSTIHVLQGSPWVILSRPFLEFCIFGWDNLPRTLLMYFTNVKLSQEGYFHSVICNAPEFKNTTVNGNLRYIVWDDPPKMEPLFLNASDYNQMADSGAAFARQFQFNNPVLDMIDEKILHRGSHRTTPGMWCTGRRSWWADPCSQWGDVNIVKPGPQAKKLQGSVSDLLDGWNSQTNQCR 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03447 272 Pfam Core-2/I-Branching enzyme 20 185 IPR003406 GO:0016020|GO:0016757
Vimu3g03447 272 PANTHER GLYCOSYLTRANSFERASE 20 271 IPR044610 GO:0015020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03447 Vimu-Chr3 47494239 47495185 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g03447 21 272 Glycosyltransferase AT1G71070 65.873 1.90e-127 366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03447 3 47494239 47495185 Vimu3g03447 3 47494239 47495185 ECH