Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03440 ATGGGTGCTCTTGATTTTCTTTCCGACTACTTCTCAGTTTCCACCCCAAAAAAGAAACGCAAACCAATGCAGACAGTTGAAATCAAAGTGAAAATGGACTGTGATGGCTGTGAAAGAAGAGTTCGCAATTCTGTTTCCAACATGTCAGGTGTGAAAGAGGTAGAAGTAAATAGAAAACAAAGCAAGGTAACAGTAACAGGTTACGTGGATAGAAACAAGGTCCTAAAGAAAGTACAAGGAACTGGAAAAATAGCTGAGTTTTGGCCTTATATTCAGTACAACTTGGTGGCATATCCCTACGTGGCACAAGCATATGACAGGAAAGCACCATCTGGGTATGTGAAAAACACTGAACAAGCACTCCCCAACCCAAACGATGAGAAACTCACCTCTCTCTTCAGTGATGACAACCCCAATGCATGTTTAATCATGTAA 435 0.4115 MGALDFLSDYFSVSTPKKKRKPMQTVEIKVKMDCDGCERRVRNSVSNMSGVKEVEVNRKQSKVTVTGYVDRNKVLKKVQGTGKIAEFWPYIQYNLVAYPYVAQAYDRKAPSGYVKNTEQALPNPNDEKLTSLFSDDNPNACLIM 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03440 144 ProSiteProfiles Heavy-metal-associated domain profile. 23 86 IPR006121 GO:0046872
Vimu3g03440 144 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 25 141 IPR045181 GO:0046872
Vimu3g03440 144 FunFam Heavy metal-associated isoprenylated plant protein 26 11 88 - -
Vimu3g03440 144 Gene3D - 10 88 - -
Vimu3g03440 144 Pfam Heavy-metal-associated domain 29 83 IPR006121 GO:0046872
Vimu3g03440 144 SUPERFAMILY HMA, heavy metal-associated domain 22 89 IPR036163 GO:0046872
Vimu3g03440 144 CDD HMA 27 86 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03440 Vimu-Chr3 47448404 47449442 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03440 3 47448404 47449442 Vimu3g03440 3 47448404 47449442 ECH