Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03437 ATGGGGTTGACCCGAGTCAACCTTCTGGCTGGCTTACTTGGAAGTTACATCATCCGCGATCCCGTCGTGGAGGAGCCGTTGGGGTTACCCAACGGTGACGAATTCGATCGACCGTTGGTCGTCTTCGATCGTAGCTTCCGCACCGACGGTTCCATCTTCATGAGTTCCATCGGTAACAACCCCGATATACACCCTCAGTGGCAGCCAGAGTATTTCGGTGACGCCATCATCGTCAACGGCAAAGCGTGGCCGCGCCTCACAGTACGACGTCGTAAGTACCGATTCCGCATAATAAACGCCAGCAACGCCAGGTTCTTCAGATTCTTCTTCTCCAACGGCTTGAGATTCACGCACGTGGCATCCGATTCGGCGTACATAGAAAAACCCGTGACGACAAACGAGACTCTGGTGGGGCCATCTGAGATCACAGACATCGTCGTTGACTTCTCTCAATCTAAGACTAACGTCGCTATCCTAGCTAACGATGCAAACTATCCTTACCCTTCTGGTGACCCCGTTAACGAGGATAACGGCAAGGTCATGAAGTTTATCATTCTACCCGATCAAGAAGTCGACACGTCACGGCTTCCTCGACGATTGGTGGAATACCCCGTCGTGGATTTATCCAGTGTGACGCACACACGGTACGTTGCCATGTACGAGTACGTGAGCAAAATCGATGAGCCAACCCACCTGTATCTAAATGCAAAACCGTTCGAGGCACCGGTAACGGAAACCCCGAGGGTGGGTTCCACAGAGGTGTGGTATGTGATAAACTTGACGGAGGATAATCACCCGCTGCACATTCATTTGGGTTTGTTGAAGGTGTTTGATCAGACGGCTCTGGTGGAGCTTGAAGAGTTCAAGGAATGCATGACAAAAAAGAACGACGCAGTGAAGTGCAACCTGAAGAAGCACGCACGTGGGAAGAAAGTAGCGGTCCCAGATCACGAGAAAGGGTGGAAGAATGTGTTCAAGATGATACCTGGGCATGTAACGAAGATTGCAGTGAGGTTTTCTTACATACACACCAACGCATCCTATTCCTTTGATGCAACCGCAGAACCTGGCTATGTCTACCATTGCCATGTATTGGATCATGAAGACAATGCTATGATGAGACCCTTGAAGCTCGTCAACTGA 1143 0.5039 MGLTRVNLLAGLLGSYIIRDPVVEEPLGLPNGDEFDRPLVVFDRSFRTDGSIFMSSIGNNPDIHPQWQPEYFGDAIIVNGKAWPRLTVRRRKYRFRIINASNARFFRFFFSNGLRFTHVASDSAYIEKPVTTNETLVGPSEITDIVVDFSQSKTNVAILANDANYPYPSGDPVNEDNGKVMKFIILPDQEVDTSRLPRRLVEYPVVDLSSVTHTRYVAMYEYVSKIDEPTHLYLNAKPFEAPVTETPRVGSTEVWYVINLTEDNHPLHIHLGLLKVFDQTALVELEEFKECMTKKNDAVKCNLKKHARGKKVAVPDHEKGWKNVFKMIPGHVTKIAVRFSYIHTNASYSFDATAEPGYVYHCHVLDHEDNAMMRPLKLVN 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03437 380 Gene3D - 3 201 IPR008972 -
Vimu3g03437 380 FunFam Multi-copper oxidase type I family protein 22 201 - -
Vimu3g03437 380 SUPERFAMILY Cupredoxins 32 158 IPR008972 -
Vimu3g03437 380 Gene3D - 202 380 IPR008972 -
Vimu3g03437 380 CDD CuRO_2_CotA_like 35 185 - -
Vimu3g03437 380 Pfam Multicopper oxidase 74 165 IPR001117 -
Vimu3g03437 380 CDD CuRO_3_CotA_like 212 378 - -
Vimu3g03437 380 ProSitePatterns Multicopper oxidases signature 2. 361 372 IPR002355 GO:0005507
Vimu3g03437 380 PANTHER CUPREDOXIN SUPERFAMILY PROTEIN 1 379 IPR045087 -
Vimu3g03437 380 Pfam Multicopper oxidase 235 376 IPR011706 GO:0005507|GO:0016491
Vimu3g03437 380 FunFam Spore coat protein A 202 380 - -
Vimu3g03437 380 SUPERFAMILY Cupredoxins 204 376 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03437 Vimu-Chr3 47418658 47423230 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03437 3 47418658 47423230 Vimu3g03437 3 47418658 47423230 ECH