Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02699 ATGTTCTTTGTTTCCTTCAACTTTTACACTGACCCCACTTTTTCTTCTCTACTCTACTCTCTCTCCATTAATAACACTCCTCACACTCCTTCTCCTTCCTCCATTTCCTATCTTCCTTCTTTCCTACCAATGACTGACATCACTGATGATGTGGCTGAGGAAATCTCCTTCCAGAGCTTCGACGATGACTGCAGGTTGCTCGGGAATCTCCTCAATGACATTCTCCAGCGCGAGGTTGGCACCAACTTAGTTGACAAGATCGAAAGGATTCGAGTCCTTGCTCAGGTCAAACCAACCTTTCACCCTTTTTCCTTTTCCTTCACTCACGGGGCTCTCCTTCTTTTGCTTCTTCAGGGGGTGTTGCTGTTACCTGTTAATAGTGGTTGTAATATGAGGCAGGCGGGTATTTTGAACATGGCAGAGCTGCTTGAGAAGCAGTTGGCTTCGGAGTTGTCGAAGATGACACTAGAAGAAGCTTTCACCCTTGCTCGTGCCTTCAGCCATTATCTTACTTTGATGGGCATAGCTGAGACCCATCACAGGGTTCGTAAAGGAGGGAATGTGGCACAAACTGCAAAATCTTGCGACGATATATTTAACCAGCTGGTGCAGGGTGGAGTTTCCCCAGAAGAACTTTATGACACAGTCTGCAAGCAGGAAGTGGAAATTGTTCTCACGGCTCATCCCACGCAGATTAACCGTCGAACCTTACAATTCAAGCACGTTAGAATTGCTCATCTTTTGGATTATAATGATCGACCCGATCTTAGCACTGAAGATCGAGAAATGGTGATTGAAGATCTGGTGAGAGAGATAACTTCAATATGGCAGACAGATGAACTGAGGCGCCAAAAGCCCACACCAGTAGATGAAGCTAGAGCTGGTTTCAACATTGTGGACCAGTCACTATGGAAAGCCGTTCCTCATTACTTACGACGTGTTAGCAATGCTCTAAAGAAGCATACAGGAAAGCCACTTCCCTTGACCTGCACTCCCATAAAGTTTGGATCTTGGATGGGAGGTGATAGAGATGGGAACCCAAATGTGACAGCAAAGGTCACCAAAGATGTTTCACTTCTATCTAGATGGATGGCGATTGATCTCTATATAAGGGAGGTGGACAGCCTCAGATTCGAACTATCCATGAACCAGTGCAGTGATAGGCTGTCAAGACTGGCACATGACATTCTAGAAGCTAAACGTGATAATCCCCGTGAGAATTGGAACCAATCCGTGAATAGAAGTCCCGCACTCCCAACACAACTTCCAGCTAGAGCTCATTTACCTTCCATTGCTGAAAATGGTGAATCTCGGCATCCTAGACTAGACATTCCAGGACCTGATCACATGCAATCTAATCACAAGGATGGTGGGGCTGCCTTAAGTTCATCTACATCGAAAAATGCCAATCCCAATATTCAATCTCAAGGAACAAGTTCAGCAAATTCCAATGCTTCTTCAGCTACAACTTCATCTTCTTTTGGTCAAAAGAAATTGTATGCTGAACCCCAGACAGGAAAGTCCACTTTTCAGAAGCTTTTAGAACCAATGCTGCCTCAACTTCCTGGAATTGCTCCGTACAGAATTGTCCTGGGGAATGTTAAGGATAAGCTTGAGAGAAGTCGTAGACGATTAGAACTACTTCTTGAGGATGTTGCTTGTGACTATGATCCTTCGGAGTACTATGAAACATCTGATCAGCTTTTGGAACCTCTGCTTCTCTGTTACGAGTCTCTGCAATCATGTGGATCTGGGGTGCTAGCTGATGGTCGACTTGCTGATTTGATTCGTAGAGTTGCTACCTTTGGAATGGTGTTGATGAAGCTAGACTTGCGTCAGGAATCTGGGAGACACGCAGAAGCACTTGATGCAATAACAGAGTATTTAGATATGGGTACTTACAGTGAATGGGATGAAGAAAAGAAGTTGGACTTTTTAACAAAAGAACTGAAAGGGAAGAGGCCTCTAGTTCCTCTTAGTATAGAGGTTCCTTCTGATGTTAAAGAAGTCTTGGATACATTCCGAATTGCTGCTGAACTAGGGAGTGATTCACTAGGAGCTTATGTGATTTCTATGGCCTCAAATGCAAGCGATGTCCTTGCAGTAGAGCTTTTGCAGAAGGATGCACGGCTTGCTGCTATTGGTGAGTCAGGAAAAGCATGTCCTGGTGGAACGTTGCGAGTGGTACCTCTGTTTGAAACTGTGAAAGATCTGAGAGGAGCTGGTGCTGTTATCCGAAAACTTCTATCGATAGACTGGTACCGTGAACACATCATTAAGAACCACAACGGACATCAAGAGGTTATGGTTGGATATTCTGATTCGGGTAAAGACGCTGGTCGCTTTACTGCTGCCTGGGAACTTTTCAAAGCTCAGGAGGATGTTGTAGCGGCATGCAATGATTATGGGATAAAGGTTACACTATTCCATGGCCGTGGAGGCAGTATTGGTCGTGGTGGAGGGCCAACATATCTGGCTATTCAGTCCCAGCCCCCTGGGTCTGTTATGGGAACCCTTCGGTCTACTGAGCAGGGAGAGATGGTGGAGGCAAAGTTTGGGTTGCCACAAATAGCTGTTAGACAACTTGAGATATACACAACAGCAGTGCTACTTGCAACCCTTCGTCCTCCTATTCCACCCAGAGAAGAAAAATGGCGGAATGTAATGGAAGAGATATCAAACATCAGTTGCCAGTGTTACCGCAATGTAGTGTATGAAAATCCAGAATTCCTGGCCTACTTCCATGAAGCCACACCAGAGGCAGAACTTGGCTTCCTTAACATAGGTAGCCGCCCTGCAAGAAGGAAGAGCTCAAGAGGAATTGGACACCTTCGTGCAATTCCGTGGCTATTTGCATGGACACAAACAAGATTTGTTCTTCCAGCATGGCTTGGAGTTGGAGCAGGTCTAAAAGGAGCTTGTGAGAAAGGTTTGACTGAAGATCTAAAAGCCATGTACAAAGAATGGCCATTCTTCCAAAGTACCATAGATCTGATTGAGATGGTTTTGGGAAAAGCAGACATTCCTATAGCCAAACACTATGATGAAGTCCTTGTGTCACAGGAGAGGCAAGAGCTTGGTGGTGAACTAAGAAGTGAGCTCATGACGGCTGAAAAGTTTGTACTAGTAATTAGTGGGCACGAGAAACTTCAGCAGAACAATAGGAGCTTGAGGAGGCTGATTGAGAATAGACTTCCCTTTCTCAATCCCTTGAACATGTTGCAGGTGGAGATCCTCAAGAGGTTAAGGCGTGATGATGACAACATTAAAATTAGAGATGCTTTGCTTATCACCATAAATGGAATTGCTGCAGGGATGAAGAATACAGGTTGA 3333 0.4497 MFFVSFNFYTDPTFSSLLYSLSINNTPHTPSPSSISYLPSFLPMTDITDDVAEEISFQSFDDDCRLLGNLLNDILQREVGTNLVDKIERIRVLAQVKPTFHPFSFSFTHGALLLLLLQGVLLLPVNSGCNMRQAGILNMAELLEKQLASELSKMTLEEAFTLARAFSHYLTLMGIAETHHRVRKGGNVAQTAKSCDDIFNQLVQGGVSPEELYDTVCKQEVEIVLTAHPTQINRRTLQFKHVRIAHLLDYNDRPDLSTEDREMVIEDLVREITSIWQTDELRRQKPTPVDEARAGFNIVDQSLWKAVPHYLRRVSNALKKHTGKPLPLTCTPIKFGSWMGGDRDGNPNVTAKVTKDVSLLSRWMAIDLYIREVDSLRFELSMNQCSDRLSRLAHDILEAKRDNPRENWNQSVNRSPALPTQLPARAHLPSIAENGESRHPRLDIPGPDHMQSNHKDGGAALSSSTSKNANPNIQSQGTSSANSNASSATTSSSFGQKKLYAEPQTGKSTFQKLLEPMLPQLPGIAPYRIVLGNVKDKLERSRRRLELLLEDVACDYDPSEYYETSDQLLEPLLLCYESLQSCGSGVLADGRLADLIRRVATFGMVLMKLDLRQESGRHAEALDAITEYLDMGTYSEWDEEKKLDFLTKELKGKRPLVPLSIEVPSDVKEVLDTFRIAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAAIGESGKACPGGTLRVVPLFETVKDLRGAGAVIRKLLSIDWYREHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELFKAQEDVVAACNDYGIKVTLFHGRGGSIGRGGGPTYLAIQSQPPGSVMGTLRSTEQGEMVEAKFGLPQIAVRQLEIYTTAVLLATLRPPIPPREEKWRNVMEEISNISCQCYRNVVYENPEFLAYFHEATPEAELGFLNIGSRPARRKSSRGIGHLRAIPWLFAWTQTRFVLPAWLGVGAGLKGACEKGLTEDLKAMYKEWPFFQSTIDLIEMVLGKADIPIAKHYDEVLVSQERQELGGELRSELMTAEKFVLVISGHEKLQQNNRSLRRLIENRLPFLNPLNMLQVEILKRLRRDDDNIKIRDALLITINGIAAGMKNTG 1110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02699 1110 Hamap Phosphoenolpyruvate carboxylase [ppc]. 52 1110 IPR022805 GO:0006099|GO:0008964|GO:0015977
Vimu3g02699 1110 Pfam Phosphoenolpyruvate carboxylase 143 405 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vimu3g02699 1110 Pfam Phosphoenolpyruvate carboxylase 522 1110 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vimu3g02699 1110 Gene3D Phosphoenolpyruvate/pyruvate domain 363 443 - -
Vimu3g02699 1110 Gene3D Phosphoenolpyruvate/pyruvate domain 459 604 - -
Vimu3g02699 1110 Coils Coil 531 555 - -
Vimu3g02699 1110 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 47 1110 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vimu3g02699 1110 MobiDBLite consensus disorder prediction 404 423 - -
Vimu3g02699 1110 MobiDBLite consensus disorder prediction 432 450 - -
Vimu3g02699 1110 PRINTS Phosphoenolpyruvate carboxylase signature 223 236 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vimu3g02699 1110 PRINTS Phosphoenolpyruvate carboxylase signature 276 292 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vimu3g02699 1110 PRINTS Phosphoenolpyruvate carboxylase signature 335 350 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vimu3g02699 1110 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 224 235 IPR018129 -
Vimu3g02699 1110 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 62 1110 IPR015813 GO:0003824
Vimu3g02699 1110 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 768 780 IPR033129 -
Vimu3g02699 1110 MobiDBLite consensus disorder prediction 431 498 - -
Vimu3g02699 1110 MobiDBLite consensus disorder prediction 456 498 - -
Vimu3g02699 1110 FunFam Phosphoenolpyruvate carboxylase 1 484 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02699 Vimu-Chr3 41214648 41222898 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g02699 3 41214648 41222898 Vimu3g02699 3 41214648 41222898 ECH