Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02687 ATGACTTTACTTTTCTTTTTCTTTTTCTTCACCATCACTATCACCACCTCTGCACCACCACCACCACTACACCCTCCTCCGCCACACCCCTACGGTTTATCCTATCACATTAACTCTGGCACTTCTGCCAACTCCACAGACTCCTTCAACACCACATGGCTTTCCGACCGTTTCTTCTCCGCCGGCTCCTCCGCCCTCGTCTCCCACCCTCTCAACTTCCCCCTCCCCTCCGAGAAAACCCTCCGCTTCTTCCCTCCTTCCTCCTACGGCAAGAAAAACTGCTACACCTTCCCCTCCCTCCCCTCCTCCTCTCGCTACCTTCTCCGCACCTTCACCGTCTACGACAACTATGACGCTAAGTCCCGCCCTCCCTCCTTCGACGTTGCCCTCTCCTCCACCGTCCTCTTCAGCTGGCGCTCCCCCTGGCCCGAGTCCACCGCTTCCAATGGCGCCTACTCCGACCTCTTCGCCTCCCTCTCCAACACCTCCTCCTCACTCGATCTCTGCTTCTACGGCTTCGCCACCGATGCCCCCCTCATCTCCTCCATCGAGCTCATCCAGGTGCACCCTGCCGCCTACGACGCACCCGACAACATTATCCTCGTCAACTACGGCCGCATTTCCTGCGGCGCCCCCCAGCATTGGGGAGCCGCCTTCTCCAACGATACCGACCGCTTCGCCCGCTCCTGGCAGCCGGACTCTGCCTTCCGAAAAATCCCCCAAGATTCCAACGACGTCCGCTTCCTCTCCACGTCGAACTCGATCTCCGGCGTCGACGAGGAGCCTAATTACTTCCCCATGAAGGTGTACCAGTCGGCGGTGACCACGGAGGGGACGCTGGAGTACGAATTGGAGGTGGACGCGAAGATGGACTATACCGTGTGGCTGCACTTCGCAGAAATCGATTCCAGCGTGAAAAAAGTAGGGGAGAGGGTCTTCGACGTGTTCATCAACGGCGATAATGTTACCAGGGTTGACATATACAAACAAGTTGGTGGTTTCTCTGCGTTGACTTTGAATTACACCCTCAAGAACTTGAGCTCCAACGCATTTTCACTGAAGCTCGTGCCGGTTGTGGGTGCCCCTCTCATTAGTGGCGTTGAGAATTACGCATTGGTTCCTATCGATCCCTCCACTCTCCCTCTCCAAGCGAGTGCGATGAAGGCGTTGAAAGAGTCGCTTCGTATTCCTGATAGAATGGGTTGGAATGGTGATCCCTGCGCCCCTACTACTTGGGATGCTTGGGAGGGTGTTACCTGCCGCATGACTACCGATAAAACTGCTCTCGTCATAAGTGAGATAGATCTTGGCACTCAGGGCTTGAAAGGGTACATAAGCGACCAGATTAGTCTTTTGTCCAACTTGGTAAGCCTGAATTTGAGTTCTAATTCCTTGGCAGGCGAAATTCCAGCTGGACTGGGTCAAAAATCTCTTATACAAGTGGATTTATCCAACAATCAGTTAACGGGATCCATACCTGCCGGTTTGGCATCTTCGAATTTGAAGCTCGTGCTACTGAATGGTAACCTATTGGAAGGGCGAGTTCCAGAGCAACTTTATTCTGTTGGTGTGCATGGTGGAGCTATTGATCTCTCTGGCAACAAGGGATTGTGCGGTGTACCATCTCTTCCATCATGTCCTATGTTTTGGGAGCATGGCAGATTATCCAAGCGGGCATTAGCCGCCAAGAGAAACCGCTATCAGAGGCAGAAATCGTTGATGCTTCTTGAGCTAGAGAGTCAACATGCCAAGGGACTACCTTCACCTTTTACTCCACTATAA 1782 0.5337 MTLLFFFFFFTITITTSAPPPPLHPPPPHPYGLSYHINSGTSANSTDSFNTTWLSDRFFSAGSSALVSHPLNFPLPSEKTLRFFPPSSYGKKNCYTFPSLPSSSRYLLRTFTVYDNYDAKSRPPSFDVALSSTVLFSWRSPWPESTASNGAYSDLFASLSNTSSSLDLCFYGFATDAPLISSIELIQVHPAAYDAPDNIILVNYGRISCGAPQHWGAAFSNDTDRFARSWQPDSAFRKIPQDSNDVRFLSTSNSISGVDEEPNYFPMKVYQSAVTTEGTLEYELEVDAKMDYTVWLHFAEIDSSVKKVGERVFDVFINGDNVTRVDIYKQVGGFSALTLNYTLKNLSSNAFSLKLVPVVGAPLISGVENYALVPIDPSTLPLQASAMKALKESLRIPDRMGWNGDPCAPTTWDAWEGVTCRMTTDKTALVISEIDLGTQGLKGYISDQISLLSNLVSLNLSSNSLAGEIPAGLGQKSLIQVDLSNNQLTGSIPAGLASSNLKLVLLNGNLLEGRVPEQLYSVGVHGGAIDLSGNKGLCGVPSLPSCPMFWEHGRLSKRALAAKRNRYQRQKSLMLLELESQHAKGLPSPFTPL 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02687 593 Gene3D Ribonuclease Inhibitor 382 548 IPR032675 -
Vimu3g02687 593 Gene3D - 204 371 - -
Vimu3g02687 593 FunFam Putative LRR receptor-like serine/threonine-protein kinase 382 547 - -
Vimu3g02687 593 PANTHER OS07G0107800 PROTEIN-RELATED 37 510 - -
Vimu3g02687 593 Pfam Malectin-like domain 40 371 IPR024788 -
Vimu3g02687 593 SUPERFAMILY L domain-like 412 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02687 Vimu-Chr3 41031125 41035147 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02687 79 496 Receptor kinase-like Gene Family AT1G05700 29.909 2.34e-31 128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g02687 3 41031125 41035147 Vimu3g02687 3 41031125 41035147 ECH