Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02681 ATGGATGGACAATGGACCCTCTCGCCGGGCCAAATGGTGGTACTCAACTTTCCACACTGTGACAGCCATGATAGGTGCTGGTGTTCTCAGCCTGCCCAATGCCATGGCATATCTTGGATGCTGAATGTTTATTATCTCTTCTCTTCTGTACAGGGGTCCAGGGATCTTGATGTTGTTGTTATCATGTTGCATGAGTGTGTTCCTGGAACTCGTTTTGATCGCTACCTTGATCTTGGTAGACATGCTTTTGGACCAAAACTTGGGCCATGGATTGTGCTCCCCCAGCAGCTAATAGTCCAGGTTGGGTGTGATATTGTCTACATGGTTACTGGGGGGAAGTGCCTAAAGAAGTTCATGGAGATAGCATGCATCGATTGCACACAACTCAAACAGTCTTACTGGATTCTGGTCTTTGGTGCCATCCATTTCTTTCTTTCTCAGCTTCCCAATTTCAATTCTGTTGCTGGGGTTTCTTTAGCTGCAGCAATAATGTCATTAAGCTATTCAACGATAGCCTGGTTGGCTTGCTTGACTAGAGGTCGGATTGGCAATGTTAGCTATGCTTACAAGAGAAGCAGCAACACTGAGTTCATGTTCCGGGTCTTCAATGCGTTAGGTCAAATCTCATTTGCATTTGCTGGCCATGCAGTGGCCCTTGAGATTCAGGCTACAATTCCATCAACCCCTGAGAAACCATCAAAGATACCAATGTGGCACGGTGCTCTCGGTGCCTATTTTATTAATGCAATATGCTATTTCCCAGTTGCACTCATAGGATACTGGGCATTTGGGCAAGTTGTTGAGGATAATGTGCTCATGGCACTAGAAAGGCCTCCATGGCTTATTGCCTCTGCTAACTTGATGGTCTTTGTCCATGTTATCGGTAGCTACCAGGTCTATGCTATGCCTGTTTTTGACATGATTGAGAGATTGATGACCAGAAGATTGAACTTCCCTTCAGGATTAGCACTCAGACTTGTTTCTCGATCTGCTTATGTTGCTTTTACGTTATTCATTGGGGTCACTTTTCCTTTCTTTGGCGATCTTCTTGGGTTCTTTGGTGGATTTGGTTTTGCTCCCACTTCATATTTTCTTCCTAGTATAATGTGGCTGATAATCAAGAAGCCAAGAAGATTCAGCATCAACTGGTTCATCAATTGGGCTGCAATATACATAGGAGTGTGCATTATGTTGGCATCAACTATTGGTGGCTTGAGGAACATCGCTGCTGATGCCTCCAGTTATAGTTTCTATACCTAA 1260 0.4437 MDGQWTLSPGQMVVLNFPHCDSHDRCWCSQPAQCHGISWMLNVYYLFSSVQGSRDLDVVVIMLHECVPGTRFDRYLDLGRHAFGPKLGPWIVLPQQLIVQVGCDIVYMVTGGKCLKKFMEIACIDCTQLKQSYWILVFGAIHFFLSQLPNFNSVAGVSLAAAIMSLSYSTIAWLACLTRGRIGNVSYAYKRSSNTEFMFRVFNALGQISFAFAGHAVALEIQATIPSTPEKPSKIPMWHGALGAYFINAICYFPVALIGYWAFGQVVEDNVLMALERPPWLIASANLMVFVHVIGSYQVYAMPVFDMIERLMTRRLNFPSGLALRLVSRSAYVAFTLFIGVTFPFFGDLLGFFGGFGFAPTSYFLPSIMWLIIKKPRRFSINWFINWAAIYIGVCIMLASTIGGLRNIAADASSYSFYT 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02681 419 PANTHER OS05G0424000 PROTEIN-RELATED 61 404 - -
Vimu3g02681 419 Pfam Transmembrane amino acid transporter protein 63 403 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02681 Vimu-Chr3 40963936 40966771 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02681 60 418 Organic Solute Cotransporters AT1G25530 76.323 0.0 547
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g02681 3 40963936 40966771 Vimu3g02681 3 40963936 40966771 ECH