Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02383 ATGGCAGATCAAACCCGGGATTCAGGAACCGTTTCCGTTGAAGCTTCACGACAAAGAAGGAAGCTTCCCAACTTTCTGCTATCTGTCAGACTTAAGTATGTCAAGCTTGGCTACCACTATGTAATCTCCAATGCTATGTACCTTTTGCTCATACCCTTTATTGGGGTGGCTTCTGCTCATCTGTCAACTTTCTCTTACCAAGATGTTGCTCAACTATGGGAAAACCTAAAGTTCAATCTTGTCTCGGTGACTCTATGTTCTAGTCTCATAGTTTTCCTTGTTACCTTTTACTTCATGAGCCGTCCAAGAGGTGTTTACTTGGTGGACTTTGCCTGTTACAAACCAGAGCCGGACTGCACTTGCACAAGGGAGACTTTCATGGACCGGTCTGCCAAAACCGGGGTCTTTTCAGAGGAGAACTTGGCCTTTCAGAAGAAAATACTTGAGAGGTCTGGTTTGGGGCAGAAGACATACTTGCCTCCGGCAATCTTGAGTCTCCCACCAAACCCGTGTATGGCTGAAGCAAGGAAAGAAGCGGAGCAAGTAATGTTTGGAGCTATTGACCAGCTTCTGGCAAAAACTGGGGTTAAGGCAAAGGATATTGGGATTTTGGTGGTGAATTGTAGCTTGTTCAACCCCACACCATCTCTCTCTGCAATGATTGTGAACCACTACAAGTTGAGAGGGAATATCCAAAGTTATAATCTTGGTGGCATGGGTTGCAGCGCTGGCCTTATCTCCATAGACCTTGCCAAGCAGCTCCTCCAGGTTCATCCAAATTCTTATGCCTTAGTGGTGAGCATGGAGAATATCACTCTGAACTGGTATTTTGGCAACAACCGGTCAATGCTTGTTTCAAATTGTCTCTTCAGAATGGGTGGAGCAGCGGTCCTTCTCTCCAACAGGTCTTCTGATCGCAGAAGAGCCAAATACCAATTGATCCACACAGTGCGTACTCATAAGGGTGCAGATGACAAATGCTACGGTTGCGTTTTCCAAGAAGAGGATGAGAAAAAAACAATTGGTGTGGCACTCTCAAAGGACTTAATGGCTGTTGCTGGAGAAGCCCTGAAGACCAATATCACAACACTTGGGCCATTAGTACTTCCGATGTCAGAGCAGCTTTTGTTTTTCGCAACTTTGGTGGCTAGAAAAGTGTTCAAGATGAAGATAAAACCCTACATCCCTGACTTTAAGCTAGCTTTTGAGCACTTTTGCATCCATGCTGGAGGAAGAGCAGTGTTGGATGAATTGGAGAAGAATCTTGAGCTCAGTGATTGGCACATGGAGCCTTCAAGAATGACTCTCAATAGGTTTGGTAACACTTCTAGCAGTTCCTTGTGGTATGAACTGGCCTACACTGAAGCTAAAGGGAGAATCAGAAAAGGTGACAGGACTTGGCAGATAGCATTTGGCTCTGGCTTCAAGTGCAACAGTGCTGTGTGGCGTGCATTGAGGACAATTAATCCTGCCAAGGAGAAAAATCCTTGGATGGATGAGATTCACGACTTTCCTGTTCATGTGCCTAAAGTGGCAACCATTGGTTCCTAG 1551 0.4545 MADQTRDSGTVSVEASRQRRKLPNFLLSVRLKYVKLGYHYVISNAMYLLLIPFIGVASAHLSTFSYQDVAQLWENLKFNLVSVTLCSSLIVFLVTFYFMSRPRGVYLVDFACYKPEPDCTCTRETFMDRSAKTGVFSEENLAFQKKILERSGLGQKTYLPPAILSLPPNPCMAEARKEAEQVMFGAIDQLLAKTGVKAKDIGILVVNCSLFNPTPSLSAMIVNHYKLRGNIQSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNWYFGNNRSMLVSNCLFRMGGAAVLLSNRSSDRRRAKYQLIHTVRTHKGADDKCYGCVFQEEDEKKTIGVALSKDLMAVAGEALKTNITTLGPLVLPMSEQLLFFATLVARKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSDWHMEPSRMTLNRFGNTSSSSLWYELAYTEAKGRIRKGDRTWQIAFGSGFKCNSAVWRALRTINPAKEKNPWMDEIHDFPVHVPKVATIGS 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02383 516 SUPERFAMILY Thiolase-like 91 309 IPR016039 GO:0016746
Vimu3g02383 516 PIRSF Very_long_ch_3-ktacl-CoA_syn 24 516 IPR012392 GO:0006633|GO:0016020|GO:0016747
Vimu3g02383 516 SUPERFAMILY Thiolase-like 290 486 IPR016039 GO:0016746
Vimu3g02383 516 Pfam FAE1/Type III polyketide synthase-like protein 97 386 IPR013601 GO:0006633|GO:0016020|GO:0016747
Vimu3g02383 516 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 403 483 IPR013747 -
Vimu3g02383 516 CDD CHS_like 87 482 - -
Vimu3g02383 516 Gene3D - 117 484 IPR016039 GO:0016746
Vimu3g02383 516 PANTHER 3-KETOACYL-COA SYNTHASE 76 507 IPR012392 GO:0006633|GO:0016020|GO:0016747
Vimu3g02383 516 FunFam 3-ketoacyl-CoA synthase 115 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02383 Vimu-Chr3 38306284 38309900 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02383 20 514 Miscellaneous Gene Families AT2G26640 77.172 0.0 831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g02383 3 38306284 38309900 Vimu3g02383 3 38306284 38309900 ECH