Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g03197 ATGGGTTCAGTTTCTCTGAAAATTGGAGATGGAACAGCCAGATTCCAAAGAGCAACACTGTGTTCTTCAGCTGTTAACATTCTCATGATTTTCTCTGTCATAACCACCAATCTCTTTGCTCTCTACGCCTTCACTGCTTCCCCTAAACATCCCCATCACCTTCTCCACCATCATGCTCACAAGAACATTTCTCTAATCTCGGAGCAGGTCTCACTCATTCTCAGGGAGATCGATTTGTCCCAGAAGAAACTGGCCCAGATGGAGAAAGACCTTCTGGGCTACGAAAGCATTGATCTTTCAAGGCCCAACATTGCATCCGAGCTCAAACTCTTCCTCCAGCGCCACGAGCTCCCTCTGGGGAAAGACTCAAGAACTGGGATCACTGAGATGGTGCCATCTGTGGGTCACACATGTGAGAAAAATTCGGACCTGCTGTCTCAGTTCATGAGTTACAAGGTTTTCGGAGCTTGCCCTGATGATTGGAGTGTGGCGCAGAAGCTGATCTTAAGAGGATGTGAGCCTTTGCCTAGGAGGAGGTGTTTTGCAAAGACTGTTTCCAAGTTAGGTTTGTACCCCTTTCCAGATTCTCTTTGGAAGCCTGTTGGTAATAAGACTGTTAACTGGAGTGGTCTTGGTTGTAAGAACTTTGAGTGTTTGAATAGTAAGAAGTTGAGTAGGGAGTGCATTGGTTGCTTTGATTTGGTCCATGGCAATGAGAATGCCAAGTTTGTTAAGGGTAAGAGTAAGAACGATTTTCTGGTTGATGATGTGTTGGCCTTGGGAGGTGGAGGGGTTAGAATAGGGCTTGACATTGGTGGAGGGTCTGGTTCCTTTGCTGCTAGAATGGCTGATAGGAATGTTACTGTGGTTACCAACACTCTCAATGTTGATGCCCCATTCAGTGAATTCATTGCTGCAAGAGGGCTTTTTCCTCTTTACTTGAGCTTGGATCATAGGTTTCCTTTCTATGACAATGTGTTTGACTTGGTTCATGGTTCAAGCAGCTTGGATGTTGGAGGGAAGAGTGAGAAATTGGAGTTTCTGATGTTTGACATTGATAGAGTTTTGAGGGCAGGTGGTTTGTTCTGGCTGGATAACTTCTTTTGTGCAAATGAAGAAAAGAAGCAATCTTTGACTCGGTTGATTGAAAGATTTGGATATAAAAAGTTGAAATGGGTTGTGGGAGAGAAGATTGATAGTGTTGGGTCTGGCAAACCTGAAGTGGTGTTATCTGCAGTCCTTCAGAAACCTGTTAGAGTTTAG 1263 0.445 MGSVSLKIGDGTARFQRATLCSSAVNILMIFSVITTNLFALYAFTASPKHPHHLLHHHAHKNISLISEQVSLILREIDLSQKKLAQMEKDLLGYESIDLSRPNIASELKLFLQRHELPLGKDSRTGITEMVPSVGHTCEKNSDLLSQFMSYKVFGACPDDWSVAQKLILRGCEPLPRRRCFAKTVSKLGLYPFPDSLWKPVGNKTVNWSGLGCKNFECLNSKKLSRECIGCFDLVHGNENAKFVKGKSKNDFLVDDVLALGGGGVRIGLDIGGGSGSFAARMADRNVTVVTNTLNVDAPFSEFIAARGLFPLYLSLDHRFPFYDNVFDLVHGSSSLDVGGKSEKLEFLMFDIDRVLRAGGLFWLDNFFCANEEKKQSLTRLIERFGYKKLKWVVGEKIDSVGSGKPEVVLSAVLQKPVRV 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g03197 420 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 24 419 - -
Vimu1g03197 420 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 249 387 IPR029063 -
Vimu1g03197 420 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 261 388 IPR004159 GO:0008168
Vimu1g03197 420 Gene3D Vaccinia Virus protein VP39 247 401 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g03197 Vimu-Chr1 44111665 44113190 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g03197 1 44111665 44113190 Vimu1g03197 1 44111665 44113190 ECH
Vimu1g03197 1 44111665 44113190 Vimu10g03471 10 44449471 44450751 PCT