Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g03184 TATTCCACGAACCATAAACTCCCGGACGGGCGACAAATCATCGTCGGCGGCAGAAGACAATTCAACTACGAGTTTTACCCTAAAAGCGACGCCACAGCCAAAAACGCCTACTCCTTACCGTTCCTCGTTCAAACCACAGATCCTTTCGAAGAAAACAACCTCTACCCCTTCGTTTTCCTCAACGTGGATGGCACCCTCTTCATCTTCGCCAACAACAAAGCCATTCTCTTAGACTACACCAAAAACGCCGTCGTTAAAACGTTCCCCAACATTCCCGGCAACGACCCCAGGTGTTACCCCAGCACCGGTTCCGGTGTTCTCTTACCCTTACGCAGTAAAACCCCAAACTTTTCTTTCACCGAAGCTGAGGTTTTAATCTGTGGCGGAGCCCCGAGAGGGGCTTATACACAAGCCAAAAGAAAGCATACATTTATCGGAGCTTTGACAACCTGTGCCCGGATTAAAATAACCGACCCGAATCCAACCTGGGTCGTGGAGACAATGCCCGGAGGTAAAGGCAGACTCATGGGCGATATGCTTCTCCTTCCAAACGGCAACGTTTTAGTTATTAACGGGGCAGGTTCCGGAAGCGCTGGCTGGGAATACGGGCGCGACCCAGTTCTGGCTCCGTTAGTTTATTACCCGGATAAAAATCCCGGGTCGAGGTTTGAGATTCTTAACGCCAGTAACACTCCTCGAATGTATCACTCAACTGCGATTTTGGTTCGTGATGGGAGGGTTCTGGTTGCGGGGAGTAACCCCCACGTGGGGTACAATTTCACGCACGTGATTTTCCCCACCGAGCTCAGCGTTGAAGCGTTTTCGCCGCCGTATTTGGAAGCGGCGTTTCAGAATGTGCGTCCGAGAATCGTTGGCCCGGTGTCGGGGACGAGGGTAGCCTATGGGCAGACAGTGAAGGTTCGCGTCGACGTGGCAGGCGGGTCTTTGGTTCGGAGTTTGGTGCGGGTGACGGTGCTGGCGCCGCCTTTCAACACGCACTCTTTTTCGATGAATCAGAGGATGCTGGTGCTGGAACCCAGCAACGTGACAAACGTTGATGGACCAACAACGTTTGAGTTTGAGGTGACAACACCCGGTTCACCCGTTCTTGCACCACCCGGTTTTTATCTACTGTTTGTGGTCCACCAGGAAATTCCAAGCGAAGGAATTTGGATCCAAATACTATAA 1188 0.5185 YSTNHKLPDGRQIIVGGRRQFNYEFYPKSDATAKNAYSLPFLVQTTDPFEENNLYPFVFLNVDGTLFIFANNKAILLDYTKNAVVKTFPNIPGNDPRCYPSTGSGVLLPLRSKTPNFSFTEAEVLICGGAPRGAYTQAKRKHTFIGALTTCARIKITDPNPTWVVETMPGGKGRLMGDMLLLPNGNVLVINGAGSGSAGWEYGRDPVLAPLVYYPDKNPGSRFEILNASNTPRMYHSTAILVRDGRVLVAGSNPHVGYNFTHVIFPTELSVEAFSPPYLEAAFQNVRPRIVGPVSGTRVAYGQTVKVRVDVAGGSLVRSLVRVTVLAPPFNTHSFSMNQRMLVLEPSNVTNVDGPTTFEFEVTTPGSPVLAPPGFYLLFVVHQEIPSEGIWIQIL 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g03184 395 Gene3D Immunoglobulins 286 395 IPR013783 -
Vimu1g03184 395 SUPERFAMILY Galactose oxidase, central domain 7 280 IPR011043 -
Vimu1g03184 395 Pfam Galactose oxidase-like, Early set domain 287 394 IPR015202 -
Vimu1g03184 395 SUPERFAMILY E set domains 283 394 IPR014756 -
Vimu1g03184 395 Gene3D - 1 284 IPR037293 -
Vimu1g03184 395 PANTHER SECRETED PROTEIN-RELATED 1 394 - -
Vimu1g03184 395 CDD E_set_GO_C 283 394 IPR015202 -
Vimu1g03184 395 Pfam Glyoxal oxidase N-terminus 1 129 IPR009880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g03184 Vimu-Chr1 44015977 44017422 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g03184 1 44015977 44017422 Vimu1g03184 1 44015977 44017422 ECH
Vimu1g03184 1 44015977 44017422 Vimu10g03461 10 44398101 44399747 PCT
Vimu10g03462 10 44405098 44406762 Vimu1g03184 1 44015977 44017422 PCT