Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g03164 ATGCAATGCAATCCCTGTCTTTCTTCTTCTAACACAAACACAAAAATGGCATCATTCCCAATGCCACACCTCCTACCATGCACTTCTCTCCCTCACACTACTACCGCCGCTAATATATTCTTACCCTCCTCTCTCTTCCGCCGTCGCCGGACTCTCCACCCTCTCCGCTGCTCCGCCTCCGAAAAGCCGCAAGACGACGCCGTCGAGCTCCCTCTCTTCCCTCTGCCTCTCGTCCTCTTCCCGGGTGCGATCCTCCCTCTGCAGATCTTCGAGTTCCGCTACCGCATCATGATGCACACGCTCCTCCACACCGACCTCCGCTTCGGCGTGGTCTACCACGACGCCGTTTCCGGCACCTCGGAAGTGGGCTGCGTGGGGGAGGTGGTCAAGCACGAGCGCCTCGTGGACGACCGCTTCTTTCTTGTGTGCAAAGGGCAGGAGAGGTTCCGCGTGAACGACGTGGTCCGCAGCAAACCCTACCTCGTGGGACGCGTGACGTGGCTGGAGGACCGTCCGTCGGAGAACGACGGCGGAGACGACGCGGAGGCGCTGGCTCGGGAGGTGGAGGGGTACATGAAGGACGTAATACGGATCTCAAACCGGTTGGGAGGGAAAGGCGAGAAGGAGATGGGGGATTTGAGACGGAACCTTTTTCCGACGCCGTTTTCGTTCTTCGTGGGAAGCACGTTCGAGGGTGCGCCCAGGGAGCAGCAGGCGCTGTTGGAACTGGAAGACACGGCGAAGAGGTTGAAGAGGGAGAAGGAGACCCTCAAGAACACGCTTAACTACCTTACTGCTGCTTCTGCCGTCAAAGATGCTTTTCCTTCTTCTTGA 834 0.5863 MQCNPCLSSSNTNTKMASFPMPHLLPCTSLPHTTTAANIFLPSSLFRRRRTLHPLRCSASEKPQDDAVELPLFPLPLVLFPGAILPLQIFEFRYRIMMHTLLHTDLRFGVVYHDAVSGTSEVGCVGEVVKHERLVDDRFFLVCKGQERFRVNDVVRSKPYLVGRVTWLEDRPSENDGGDDAEALAREVEGYMKDVIRISNRLGGKGEKEMGDLRRNLFPTPFSFFVGSTFEGAPREQQALLELEDTAKRLKREKETLKNTLNYLTAASAVKDAFPSS 277
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g03164 277 Coils Coil 233 267 - -
Vimu1g03164 277 Pfam ATP-dependent protease La (LON) substrate-binding domain 69 258 IPR003111 -
Vimu1g03164 277 ProSiteProfiles Lon N-terminal domain profile. 70 259 IPR003111 -
Vimu1g03164 277 Gene3D - 68 170 IPR046336 -
Vimu1g03164 277 PANTHER ATP-DEPENDENT PROTEASE LA (LON) DOMAIN PROTEIN 17 276 - -
Vimu1g03164 277 SUPERFAMILY PUA domain-like 69 258 IPR015947 -
Vimu1g03164 277 SMART lon_5 69 259 IPR003111 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vimu1g03164 Vimu-Chr1 43851069 43852752 Dispersed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g03164 1 43851069 43852752 Vimu1g03164 1 43851069 43852752 ECH