Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g03150 ATGGGATCAGCTTGTTGTGTTGCTGCAAAGGATCCTAATCTTCCTAACAGAACTAGAGGTGAAAGCTTACGTAGAGATGTTGTGTATTCACCATCGTGGAGCTTTCAATGGGATAGTAGGGAACGTGTTACTGGTGAAATTGAGAATCCTTCTTATCACGCATCTCATTTAGACAGTAGAAATGTCAGCATGGAGTTAAAAGGTTCATTAAGCTCTGAAAGAGGTAATCTGTCTGATGGGGGAAGCATCATGGAGAATTCTGTGACTCCTATTTCTTTGAAGTCCCCTGTTGATGAGGCGCTGGTTGCAAATCTGATGACACCCTCGTCTGATCTGTCCATGTCAAGCAATTTTTCTACAGTGGTGAAGAATCCAGTGGAGTCTTCATTACCAAATCTTTCTTTTTCAATACCTTCAGTCTTCTCAACACCCACACTAGATCCTTTGCCTAATCATAACTATAACCATCTTCCCAACTCTACCCCAACAAGATGGACACATCGATCTCCAGCACACCCTCTGTTGAGACAGATTTCTGATAGTCGAATTATGGGTCTGAAATCACCGGACAACTCAATTTCTGAAGGAAGGCCATCCTTTGTACTCTCTACTTGCAGCAACGAAATGGCTGCTGGATCCCTCTGTGGATCATCTGATGGATGGTCAATGCGAACCTTCTCTGAGATGGTGGCATCGTCCCAAAGGGAAAGGTGGTCTTTTGATAGTGAGTGTTTTGGCTCTGGTCGTCACAAGATAAGTGGATCCAGTAGCAGGTTCTCATATTCTCCCTCCATGGAACTACAATCTTGTGGGGCTTGCTCAAAGCTTTTGACTGAGAGATCAACATGGAGCAACCAGAAGTTTATTGCCAGCAATGACCTCTCGGTTGTTGCGGTGTTGGTCTGTGGTCATGCATATCATGCAGAATGTTTGGAGGCTATGACACCAGAGGCAGATAGGTATGATCCAGCTTGTCCAATCTGTATGGTTGGAGAGAAGCACTTTTCAAAGTTGTCTAGAAAAGTTCTTCGGGCTGAATCAGAGATGAAGGCCAAGAACCACAAGATATCCAGAAACCGTGTAGTCGATAGCTACCTAGATGGTGGTTTTGATGTTTTTGATCGCCAAAAAGATATTGATTTGGGAGGAAAAGTTTCAAAAATGGAGCCAAGTTCCAGTGCAAGGAGCTCATTTGGAAAGCCATTCTTGAGGCGGCACTTTTCACTTGGATCCAAGTGGAGCCGATCCCTGTCCGATAATGATTCTGCCAGGAAGAAAGGCTTTTGGGCAAGATATCGGAAAGATTAA 1308 0.4419 MGSACCVAAKDPNLPNRTRGESLRRDVVYSPSWSFQWDSRERVTGEIENPSYHASHLDSRNVSMELKGSLSSERGNLSDGGSIMENSVTPISLKSPVDEALVANLMTPSSDLSMSSNFSTVVKNPVESSLPNLSFSIPSVFSTPTLDPLPNHNYNHLPNSTPTRWTHRSPAHPLLRQISDSRIMGLKSPDNSISEGRPSFVLSTCSNEMAAGSLCGSSDGWSMRTFSEMVASSQRERWSFDSECFGSGRHKISGSSSRFSYSPSMELQSCGACSKLLTERSTWSNQKFIASNDLSVVAVLVCGHAYHAECLEAMTPEADRYDPACPICMVGEKHFSKLSRKVLRAESEMKAKNHKISRNRVVDSYLDGGFDVFDRQKDIDLGGKVSKMEPSSSARSSFGKPFLRRHFSLGSKWSRSLSDNDSARKKGFWARYRKD 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g03150 435 SUPERFAMILY RING/U-box 269 329 - -
Vimu1g03150 435 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 256 330 IPR013083 -
Vimu1g03150 435 PANTHER EXPRESSED PROTEIN 1 333 - -
Vimu1g03150 435 ProSiteProfiles Zinc finger RING-type profile. 270 328 IPR001841 -
Vimu1g03150 435 SMART ring_2 270 328 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g03150 Vimu-Chr1 43753349 43755462 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g03150 1 43753349 43755462 Vimu1g03150 1 43753349 43755462 ECH