Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g03139 ATGCAAACAGCCACAAGGAAAGAAATGGAAACCTTGGAACTCTTTCACATGAACAAAGGCGCAGGCGAAACTAGCTATGCCATGAACTCTTCCGTTCAGAACACAATTATCTCTTGTGCAGAGGCATGGAGAAAGAAAGCCATTGTTCAAATTCTGTGCACGAGTTGGCCTGAGAAGATGGGCATTGCTGATATGGGTTGTTCCTCCGGCCCTAATGCCTTGAGGGTGATTTCTGAGATCGTGGATAGCGTCTACGCCACCACGCGTCTGTTGGAGCGGCCGCCGCCGGAGTTGGTGGTGCATTTGAACGACCTCTTCGCCAACGACTTCAACAACATCTTTGCCTCATTGCCATCTTTCTACAGAAAACAAAGACAAGAAAAGGGAACTGGGTTTGGATCCTGTTTTGTTTCAGCTGTCCCTGGCACCTTCTATGGAAGGCTTTTCCCTGCCAAGACCCTCCACTTTGTGCACTCTTCTTCCAGCCTCCATTGGCTTTCTCAGGTTCCTGGTGGATTAGAAGACGGAAGTAGAAGAGCATTGAACAAGGGAAAGATCTACATATCAAAGAGCAGTCCTGAGTGCGTGCTGGATGCTTATTCTCAGCAATTCAAGAACGATTTTTCATCGTTTATTGCTTGTCGTTCGCATGAAATGGTAACTGGAGGACGCATGGTCTTGTCTTTCATGGGCAGAACAACTATCGACCCAACTTCCGACCATAGTTGCTATCAGTGGGAACTCTTAGCACGGTCCCTTATGAGCATGGTTTCTCAGGGTCTGTTGGAAGAGGAAAAAGTGGATTGTTTTGATGTCCCGTACTACGCGCCATGTATGGAAGAAGTGAAAAAGGTGATCGAAAAGGAAGGGTCATTCATTGTGGAAGAGCACGATGCTTATGAAATAGAGTGGGATGGAGGAATGGAATTGCAGAGTGATTCGAGAGGAGAAAGAGTTTCAAGAACCCTAAGGGCTGTTCTTGAGTCCATGTTGGAATCTCATTTCGGACCTCATCTTATGGATGAGCTTTTTCGAAGGTTTGGACAACATGTGGAGGAACATTTGTCCAACAATGACACCAAGTACATCAATCTGGTCGTTTCCCTTGTCAAGCTATAA 1119 0.4638 MQTATRKEMETLELFHMNKGAGETSYAMNSSVQNTIISCAEAWRKKAIVQILCTSWPEKMGIADMGCSSGPNALRVISEIVDSVYATTRLLERPPPELVVHLNDLFANDFNNIFASLPSFYRKQRQEKGTGFGSCFVSAVPGTFYGRLFPAKTLHFVHSSSSLHWLSQVPGGLEDGSRRALNKGKIYISKSSPECVLDAYSQQFKNDFSSFIACRSHEMVTGGRMVLSFMGRTTIDPTSDHSCYQWELLARSLMSMVSQGLLEEEKVDCFDVPYYAPCMEEVKKVIEKEGSFIVEEHDAYEIEWDGGMELQSDSRGERVSRTLRAVLESMLESHFGPHLMDELFRRFGQHVEEHLSNNDTKYINLVVSLVKL 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g03139 372 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 16 359 IPR005299 GO:0008168
Vimu1g03139 372 Gene3D Vaccinia Virus protein VP39 29 359 IPR029063 -
Vimu1g03139 372 Gene3D - 15 358 IPR042086 -
Vimu1g03139 372 Pfam SAM dependent carboxyl methyltransferase 47 371 IPR005299 GO:0008168
Vimu1g03139 372 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 9 371 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g03139 Vimu-Chr1 43685295 43687275 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g03139 1 43685295 43687275 Vimu1g03139 1 43685295 43687275 ECH