Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g03106 ATGGCCTCAAACTCAGTCTGGACAACAAAGCAGAACAAGAAGTTTGAGAATGCTTTGGCCATCTACGACAAGGACACCCCAGATCGGTGGCAGAACTTGGCCAGGGCAGTGGGAGGAAAAACGGTGGAAGAAGTGAAAAGGCACTATGAGATGCTTGTTGATGATTTGAAGCAGATTGAAGAAGGTCGTGTGCCCTTGCCCAATTACAGAAAAGTTGCTGCAACAGAAGCAGGCAGCATCAGAGGTTACAGTTACATGAATGAAGAACAAAGGTTAAAATCAAACCTTATTGAATCTCTTGCATATCAATTTTGCTTCAACTGTGCTGCAGAACGAGTCATGCACACTTGTTTGAGTAGTTCCAATCCGTTTTGCATAATTTCCCGCCATTCATTCGATTCCATCGGAGAGGTTGCGATGGAAGCTTCCACTTCTTCCTACAAGATTATATTGGGTTCGGCTTCCGTCGCACGCCGCAAGATATTGGCCGAAATGGGATACCAATTCACAATAATGACTGCGGATATTGATGAGAAGAGCATCCGTAAGGAAACTCCAGAAGAGTTGGTTATGGCTCTGGCCGAAGCCAAGGCCAATGCCATTATATCCAAACTGCAATCTACCAGTAATCAAGAGAGGGTTGTTGAACCAACTATTTTAATTGCAGCAGACACAGTATGTTGCGTTCCCCTTAGCGAAGTGCTGGCAGAAGCCATCTTGCAAAGGCTCCCTGTTGATGACTACTTAAAGGATGCGGAGCCAACACTATTAATTACCTCCGACCAAGTGGTGGTGTACGAAGGTGTGATTAGGGAAAAGCCAACAAACAAAGAAGAAGCTCGACAATTCTTGAAAGATTATTCTGGAAGGCATGCTGCAACTGTGGGATCTGTACTAGTTACTAACCTTAAAACAGGATTTAGAAAAGGGGATTCAGATCGTGTGGAGATATATTTCAATGAAATACCTGATGAAATCATTGAGAAGCTGGTTGACGAGGGAATTACTCTCAATGTTGCTGGTGGGCTGATAATAGAGCATCCTTCAATACTGCCATTTGTCAAAGAAGTGGTTGGTTGA 1080 0.4389 MASNSVWTTKQNKKFENALAIYDKDTPDRWQNLARAVGGKTVEEVKRHYEMLVDDLKQIEEGRVPLPNYRKVAATEAGSIRGYSYMNEEQRLKSNLIESLAYQFCFNCAAERVMHTCLSSSNPFCIISRHSFDSIGEVAMEASTSSYKIILGSASVARRKILAEMGYQFTIMTADIDEKSIRKETPEELVMALAEAKANAIISKLQSTSNQERVVEPTILIAADTVCCVPLSEVLAEAILQRLPVDDYLKDAEPTLLITSDQVVVYEGVIREKPTNKEEARQFLKDYSGRHAATVGSVLVTNLKTGFRKGDSDRVEIYFNEIPDEIIEKLVDEGITLNVAGGLIIEHPSILPFVKEVVG 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g03106 359 Gene3D - 233 359 IPR029001 -
Vimu1g03106 359 Gene3D - 139 232 IPR029001 -
Vimu1g03106 359 SMART sant 3 55 IPR001005 -
Vimu1g03106 359 ProSiteProfiles SANT domain profile. 2 52 IPR017884 -
Vimu1g03106 359 FunFam Transcription factor SRM1 1 66 - -
Vimu1g03106 359 SUPERFAMILY ITPase-like 233 358 IPR029001 -
Vimu1g03106 359 SUPERFAMILY Homeodomain-like 5 60 IPR009057 -
Vimu1g03106 359 Gene3D - 1 66 - -
Vimu1g03106 359 CDD SANT 7 53 IPR001005 -
Vimu1g03106 359 Pfam Maf-like protein 237 359 IPR003697 GO:0047429
Vimu1g03106 359 PANTHER BIFUNCTIONAL DTTP/UTP PYROPHOSPHATASE/METHYLTRANSFERASE PROTEIN-RELATED 145 228 IPR003697 GO:0047429
Vimu1g03106 359 SUPERFAMILY ITPase-like 146 229 IPR029001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g03106 Vimu-Chr1 43462436 43471115 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g03106 1 43462436 43471115 Vimu1g03106 1 43462436 43471115 ECH