Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g03090 ATGCTTTTACCGTTTTGTACAGATGCCCAAGGATCTGACAATTCCATTCCACTCTCACCACAGTGGCTTCTGCCAAAGCCGGGGGAGAATAAACTTGGAACAGGATCTGTGGAGAACCACATGGTCTCGAACCCACCTTATGGCCATCGCTCCGAGACTGTCAAGACATCTGGAAACGGAGAGGATGTGCATGATGTCCATAAGAAAAAGGATGTCTTTAGGCCATCCATGTTTGACTCAGAAAGTGGACGTCGTGATCGTTGGCGTGATGAGGAGAGAGACACCAAGTCCTCCATTCGGAAGGATCGTTGGAGAGATGGGGACAAAGACCTAGGTGATTCTCGCAGAGTGGATCGATGGACAGATAATATGTCTGCAAGGAACTTTGCAGAAGCACGGCGTGGTGCATCTGATAATCACAGATGGAATGATTCAGGAAACAGAGAAACTAACTTTGACCAGCGGCGTGAAAGTAAGTGGAACACCCGCTGGGGTCCTGATGACAAGGAGCCAGAAGGCATCCGTGAAAAATGGAGCGACTCTGGAAAGGATGGTGATATACATTTGGAAAAAGGTGTGACTAACATTTCCAGTCAGGGAAAGGACGAGAAGGAGGGAGAACACTATCGGCCATGGAGACCTAACTACTCACAAGGCCGTGCAAGGGTAGATCCTTCCCATACAACCCCAAACAAACCAGTCTCTACATTTTCCTATGGGCGTGGCCGTGGGGAGAATACACCCCCAGTTTCTAGTATTGGACATGGACGTACTGGTTCCCTTGCTAGCTCTTTGAGTGGCACATACTCTGGAACTGCATTGGAAAAGGTTCAAAGTGGACTTGAAGAACTGAACCCCTTTAGATATAACAGGACAAAATTGCTTGATGTGTACAGAGTGACTGGTATGGGTACAAATAGAAAACTAGTTGATGATTATGTGCAGGTGCCTAATCTTACTCAGGATGAACCCTTGGAGCCTCTAGCTATTCTGGCACCAAATCCTGAGGAACTGGCTGTCTTGAATGGAATTGACAAAGGGGACATAATTAGCAGCAGTGCTCCTCAGGTTCCAAAAGATGGAAGGTCAACAGATTTTACTCACACAAGAAGAATGAAGCCTGGAAGTGCACCTTTCCAAGATAGAGGTGAAGATGGAGGTTCTTACAAAGTGCCTGAAGAGGTTTCCAGTAATAAAGATTCATCATTTGAAGGAAATACTTCTGTTCATCCTGGTGCTTCATGGCGAACAATGCCACTTGGTGATCATGCTGCCCAGTTTCACGATGGTAGAGATGTAACTAGTGATGTTAGATTGAGAAAAACAGATCTGAACTCACTCCAGCCAAAAGATCCTCATAATCAGTGGGAAAATAATTTGGGTTATTTATCTGACTCCAAAGAAGTAGGTAAGTGGCAAGCTAGTGAAGATCCTGTTATTAAGAGGCAGTTGTCTGGCATTTTGGATAGTGAACTTGAAATCAGAAGAGTTCAACAGACTGCTCCAGAGGAGTTATCCCTATTGTATAAAGATCCTAAGGGTCTAATCCAAGGTCCATTTAAAGGAATTGATATTATTGGATGGTTTGAGGCTGGTTATTTTGGTATCGATTTACCTGTTCGTCTGGAAAATTCAGCAGCTGACTCACCGTGGTTGTCTCTGGGTGATGCCATGCCCCATTTACGAGCTAAAGCTCGACCTCCACCTGGGTTTTCTACACCAAAGCCAAATGACTTCACAGATATTCCTGCCCGACAAATTTCTAGTACATTTGGGAATACTCTTACTGGTTTGAATGAGCTTGACATTTTGCGAAGTGATTCTAGGCATCGACCAAGTCCTGATACTGAAGCTGAAAATAGGTTTCTGGAGTCACTCATGTCTGGTAGCAAGAACAGTCCTCCCCTTGATGGCCTGGCATTGTCAGAAGGTTTACAAGGGTTTGTTGGAAATAATCCTGGTAATATGGGTACATCAGCAGTTGATAATGGAAATCTTTACTTGCTTGCTAAGAGGATGGCACTTGAACGACAACGGTCCTTGCCTAATCCCTACCCTTACTGGCCAGGGCGTGATGCAGCTTCGTTTGCTCCAAAGCCGGAGGTTGTCCCAGATGCCTCCATGCATTCTAAACTATTGTCTTCAGTGAGTGATAACTCTCGGCAACCTCAATCCCAAAATTCCGAGTTAATGTCAATCATCCAAGGTTTATCTGATAGGACATCTGCAGGCCTAAATAATGGTGCTGCTGGCTGGCCTAATTATCCCTTACAAGGTGCATTGGATCCCCTACAGAATAAAATTGACATGCTTCATGATCCGAATTTTCCTCAAATGCCATTTGGAATTCAGCAGCAAAGGCTGCCACCACAAAACCACTTGTCTTTAAGCAATTTACTGTCTCAAGCTGCTTCTGATAACCCAAATAACCCTTTGACAGCGGAGAAGCTACTTCCTTCAGGTTTATCACAAGATCCTCAGATATTGAATATGTTGCAACAGCAGTACTTGTTGCAGCTGCATTCTCAAGCGGCTGCTCAATCACAGCAGATCCCCTTGATTGATAAACTTCTATTGCTGAAGCAACAACAGAAGCAGGAGGAGCAGCAGCAGCTGCTACGGCAACAACAACAACAACTGCTTTCTCAAGTGTTGCAAGACCAACCATCTAGCCAGCTCTTCAGCAATTTATCTTATGGACAGTTGCAAGGTGTATTACCAATAGGTAATTTGCGTGTGGATCCTTCTCTAGTTCAACCACAACAAGAGGTTTTTCCCATGAGCTCTCAGACACCAATCCCCAATGTGCATAATGAGCATAATTCTAATTCTTTGAATCTACCACCTAAAGTTAGTCAAGATACAAGTTCTAATGTAAGCAGCCAAGGTTCTTTACGTCTTCCACACCAATTATTTGGCGATGCTCATCCAGAAAATTGGGGCCCTAATCTTACTGAACAAATTATCGATCAGCATCAGAAGGAATCATTTCCAGTATCATCAACTCAGGCTGATGGTTCTGCATTGCTTGAACAGAACAGATTCAAAGAGGAACCCCTCAATGCATCTCTTTCTCCTTCTGATTACGCTGCTAAGTCAGTGGAACAGGTGCCACCCAGTAATTTTAGGCCTGATGCTGTGGTTGTGACCTCAACTTCTAGGCCTGGGGAAAGTTCTGGAAATGTGGAGTCTTTTGCATCCAGCATTGCCTTATCTACAACTGTATCTAATGTGTCACCACCGGTGAGTGGTCCTGGTACGGAGGTGAAGACCAAATTGGATATTGTGCATCAAGAGCAACATGCTGGGAAGGACAACACTGTATCTGAGCCATCTCTGGGAGACATAAGAAAGGTTGAAGCTCAAGAACCTAAAAAGGCTAGTGAGAAGAAATCTAAGAAGCAAAAATCAAGCAAATCTCAGTCTTTTGATCAAACAAAGGGAGTGGTAAAAAATTTGACTGTGCAGCCATCAAAGCAGTCAGAAACTGAAATGGCGAAGTTAAGTGATTTTAGGGAAGCTAAGATTGACGAATCGTTAGATGATACAAATATGCAACAAACAAGAGTTAAGGGAACTCGGACTGGAAGTGCTGTCTCAGAGACTGGTGATCACCAACATGCTGGTGGCTGGTCTGGTATTATTACTGGAAAGATAACTGAAACAGTTGGTGTAGGTGAGACCAATTCAACTACTTTTTTGACACAGAAAACTGAGGTACCTGCCGGACGAGCTTGGAAACCTGCTCCAGGTGTCAAACCGAAATCTTTCTTAGAAATTCAACAGGAAGAAAAAAGGAAGGCAGAGACCGAAACACTTGTATCTGATGTTGCTATTTCTGTCAATTCAATGAGCCTAGCAACTCCCTGGGCTGGGATTGTGGCCAATCCTGACTCCTTGAAGGTATCTAGTGACAGTGTCAAAGAAGGAGGCAATACTGAGAATCATGTTAAATCTGAAACTTCTCAAAATGTCAAGAGCAAGAAAAGCCCTCTACATGATCTATTAGCAGAAGAAGTTCTAAAGAAATCTAATGAAATAGATGCTGAGGTTCCAGATAGTATATTGCCCTCACATAATATAGTTGTACAATCAGAATCATTGGATGACGGCCATTTTATTGAGGCGAAAGATACTAAAAGAAGCCGAAAAAAGTCAACAAAATCGAAGGGTTCAGGAACTAAAGCTTCATTGCCCATTGCATCATCTGATGTACCTATAGCTTCAAGCCCCAATGAAAAGGTAAAAAACTCCCGCTTGGCACAGCAGGAAAAGGAAGAGTTGCCTGTCATCCCTGCAGGACCCTCTTTCAGTGATTATGTTCTTTGGAAAGGAGAGCGAGAACCACCAAGCTCGTCTCCTTCTCCAGCATGGTCTACTGATTCCGGCAGGGTTCCAAAACCAACTTCATTGAGGGACATTCTAAAGGAACAGGAGAAAAAGTCCTCTTCTGCAATTCCTGTTAGCCCAGTTCCTCCGCCTCCAAAATCTCAGCCTACCCAGTCTACACGGAATAGTGCTTCTTCATGGTCAGTTTCAGCATCCTCTCCATCTAAAACTGCTTCTCCAATTCAGATAAATACCCAAGCTTCTCAATCAAAATACAAAGGAGATGATGATTTGTTCTGGGGTCCAATGGAGCAATCTAAGCAAGATGCTAAGCAGTCTGATTTCCCTCAGCTTGCTAGCCAAGGGAGTTGGGGTTCAAAAAACGTAAGCTCGAAAGGTAATTCCCCCGGACTATTGACAAGACAGAAATCAGTGAGTGGTAAACAAGCTGAACGGTCTCTAGCATCATCACCGGCCTCTTCTCAATCAATACTGAAATTGAAAAAAGATGCCATGACAAAGCATTCTGAGGCCACGGATTTCAGAGATTGGTGTGAGAATGAGTGTGTTAGGCTTATAGGGTCAAAAGATACAAGTTTCCTTGAATTTTGCTTGAAGCAATCCAGATCGGAAGCTGAACTGCTCCTCATAGAAAACCTTGGATCATATGATCCTGACCATGAATTCATTGATAAGTTCCTGAATTACAAGGAGTTGTTACCATCGGATGTTTTGGACATAGCTTTTCAGAGTAGGAGTGAGAAGAAAGTTGGTGGACATGGTGCGGCATTGACAGCTTCAGCTAATGCAGATACGCAGGATGTTGACTTCACTGAAGGATCCTCTAAAGGTGGTGGAAAGAAGAAAGGTAAGAAGGGGAAAAAGGTGAGCCCTTCAGTTTTGGGATTTAACGTTGTGAGTAACCGTATCATGATGGGTGAGATCCAGACTGTAGAAGATTAA 5292 0.438 MLLPFCTDAQGSDNSIPLSPQWLLPKPGENKLGTGSVENHMVSNPPYGHRSETVKTSGNGEDVHDVHKKKDVFRPSMFDSESGRRDRWRDEERDTKSSIRKDRWRDGDKDLGDSRRVDRWTDNMSARNFAEARRGASDNHRWNDSGNRETNFDQRRESKWNTRWGPDDKEPEGIREKWSDSGKDGDIHLEKGVTNISSQGKDEKEGEHYRPWRPNYSQGRARVDPSHTTPNKPVSTFSYGRGRGENTPPVSSIGHGRTGSLASSLSGTYSGTALEKVQSGLEELNPFRYNRTKLLDVYRVTGMGTNRKLVDDYVQVPNLTQDEPLEPLAILAPNPEELAVLNGIDKGDIISSSAPQVPKDGRSTDFTHTRRMKPGSAPFQDRGEDGGSYKVPEEVSSNKDSSFEGNTSVHPGASWRTMPLGDHAAQFHDGRDVTSDVRLRKTDLNSLQPKDPHNQWENNLGYLSDSKEVGKWQASEDPVIKRQLSGILDSELEIRRVQQTAPEELSLLYKDPKGLIQGPFKGIDIIGWFEAGYFGIDLPVRLENSAADSPWLSLGDAMPHLRAKARPPPGFSTPKPNDFTDIPARQISSTFGNTLTGLNELDILRSDSRHRPSPDTEAENRFLESLMSGSKNSPPLDGLALSEGLQGFVGNNPGNMGTSAVDNGNLYLLAKRMALERQRSLPNPYPYWPGRDAASFAPKPEVVPDASMHSKLLSSVSDNSRQPQSQNSELMSIIQGLSDRTSAGLNNGAAGWPNYPLQGALDPLQNKIDMLHDPNFPQMPFGIQQQRLPPQNHLSLSNLLSQAASDNPNNPLTAEKLLPSGLSQDPQILNMLQQQYLLQLHSQAAAQSQQIPLIDKLLLLKQQQKQEEQQQLLRQQQQQLLSQVLQDQPSSQLFSNLSYGQLQGVLPIGNLRVDPSLVQPQQEVFPMSSQTPIPNVHNEHNSNSLNLPPKVSQDTSSNVSSQGSLRLPHQLFGDAHPENWGPNLTEQIIDQHQKESFPVSSTQADGSALLEQNRFKEEPLNASLSPSDYAAKSVEQVPPSNFRPDAVVVTSTSRPGESSGNVESFASSIALSTTVSNVSPPVSGPGTEVKTKLDIVHQEQHAGKDNTVSEPSLGDIRKVEAQEPKKASEKKSKKQKSSKSQSFDQTKGVVKNLTVQPSKQSETEMAKLSDFREAKIDESLDDTNMQQTRVKGTRTGSAVSETGDHQHAGGWSGIITGKITETVGVGETNSTTFLTQKTEVPAGRAWKPAPGVKPKSFLEIQQEEKRKAETETLVSDVAISVNSMSLATPWAGIVANPDSLKVSSDSVKEGGNTENHVKSETSQNVKSKKSPLHDLLAEEVLKKSNEIDAEVPDSILPSHNIVVQSESLDDGHFIEAKDTKRSRKKSTKSKGSGTKASLPIASSDVPIASSPNEKVKNSRLAQQEKEELPVIPAGPSFSDYVLWKGEREPPSSSPSPAWSTDSGRVPKPTSLRDILKEQEKKSSSAIPVSPVPPPPKSQPTQSTRNSASSWSVSASSPSKTASPIQINTQASQSKYKGDDDLFWGPMEQSKQDAKQSDFPQLASQGSWGSKNVSSKGNSPGLLTRQKSVSGKQAERSLASSPASSQSILKLKKDAMTKHSEATDFRDWCENECVRLIGSKDTSFLEFCLKQSRSEAELLLIENLGSYDPDHEFIDKFLNYKELLPSDVLDIAFQSRSEKKVGGHGAALTASANADTQDVDFTEGSSKGGGKKKGKKGKKVSPSVLGFNVVSNRIMMGEIQTVED 1763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g03090 1763 MobiDBLite consensus disorder prediction 349 418 - -
Vimu1g03090 1763 MobiDBLite consensus disorder prediction 1116 1140 - -
Vimu1g03090 1763 MobiDBLite consensus disorder prediction 55 117 - -
Vimu1g03090 1763 MobiDBLite consensus disorder prediction 1369 1605 - -
Vimu1g03090 1763 MobiDBLite consensus disorder prediction 1045 1062 - -
Vimu1g03090 1763 MobiDBLite consensus disorder prediction 221 242 - -
Vimu1g03090 1763 MobiDBLite consensus disorder prediction 131 259 - -
Vimu1g03090 1763 SUPERFAMILY GYF domain 498 561 IPR035445 -
Vimu1g03090 1763 MobiDBLite consensus disorder prediction 1301 1329 - -
Vimu1g03090 1763 MobiDBLite consensus disorder prediction 1 117 - -
Vimu1g03090 1763 CDD GYF 504 561 IPR003169 GO:0005515
Vimu1g03090 1763 MobiDBLite consensus disorder prediction 1141 1164 - -
Vimu1g03090 1763 MobiDBLite consensus disorder prediction 1717 1740 - -
Vimu1g03090 1763 PANTHER GYF DOMAIN-CONTAINING PROTEIN 7 1763 - -
Vimu1g03090 1763 Pfam GYF domain 509 553 IPR003169 GO:0005515
Vimu1g03090 1763 Coils Coil 858 879 - -
Vimu1g03090 1763 MobiDBLite consensus disorder prediction 1301 1331 - -
Vimu1g03090 1763 MobiDBLite consensus disorder prediction 1391 1417 - -
Vimu1g03090 1763 MobiDBLite consensus disorder prediction 197 211 - -
Vimu1g03090 1763 MobiDBLite consensus disorder prediction 1500 1535 - -
Vimu1g03090 1763 MobiDBLite consensus disorder prediction 1036 1062 - -
Vimu1g03090 1763 MobiDBLite consensus disorder prediction 927 964 - -
Vimu1g03090 1763 MobiDBLite consensus disorder prediction 1099 1168 - -
Vimu1g03090 1763 SMART gyf_5 505 560 IPR003169 GO:0005515
Vimu1g03090 1763 MobiDBLite consensus disorder prediction 1193 1212 - -
Vimu1g03090 1763 ProSiteProfiles GYF domain profile. 504 555 IPR003169 GO:0005515
Vimu1g03090 1763 Gene3D - 489 571 IPR035445 -
Vimu1g03090 1763 MobiDBLite consensus disorder prediction 1549 1605 - -
Vimu1g03090 1763 MobiDBLite consensus disorder prediction 133 190 - -
Vimu1g03090 1763 MobiDBLite consensus disorder prediction 1452 1466 - -
Vimu1g03090 1763 MobiDBLite consensus disorder prediction 394 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g03090 Vimu-Chr1 43320106 43327185 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g03090 1 43320106 43327185 Vimu1g03090 1 43320106 43327185 ECH