Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g03084 ATGGCGGCACGCTTTCAATCTGCGGCTGGAAAGATGAAATTGAAGTCTAAGAAAGGATGGAAGTCCGTTGTGGCTGTTCATTTGAAAGGAAAATCATCAACCCGTTTTTCTTTATTTCGCAAAGTGAATTCAGGTGGCTATGGACAAGGGAAAACACCAGTTTATCTGAATGTGTATGACTTGACACCCATGAATGGTTATGTGTACTGGGCTGGTCTTGGTATCTATCACTCTGGTGTAGAAGTTCATGGTGTAGAATATGCATTTGGAGCTCATGACTATCCAACAAGTGGTGTTTTTGAGGTTGAGCCTCGACAATGCCCTGGCTTCAAATTCAGGAAGTCAATACTCATAGGAACCACAGCTTTGGATTCTACTCGTGTCAGGGAGTTCATGGAACGACAGTCAGCAAACTACAATGGCGACACATATCACTTAATTGTTAAGAATTGCAACCACTTCTGCAAAGACATCTGTTACAAGCTGACTGGGAAATCCATTCCAACATGGGTAAATCGATTGGCCAGGCTAGGTTCAATTTGCAATTGCATACTTCCTGAAGCACTGAGGATTTCTGGTGTGGGGCATGATCCTAATTATGAGGCTGAAGACAGTGAAAAGAGAAGGCTTCGAAGTGGCTTGAACTGCTTGTCCTCAATCTCCATGCGTCAGAAGCACCTCTCCACTTCTTCACTGTTTCTACAGTCACCATTAAGAGGCTGCTTGTCATCGTCATGGCCCTCCTGGGAATTGAGAAAATCCTTGAAGGAACGATAA 777 0.4389 MAARFQSAAGKMKLKSKKGWKSVVAVHLKGKSSTRFSLFRKVNSGGYGQGKTPVYLNVYDLTPMNGYVYWAGLGIYHSGVEVHGVEYAFGAHDYPTSGVFEVEPRQCPGFKFRKSILIGTTALDSTRVREFMERQSANYNGDTYHLIVKNCNHFCKDICYKLTGKSIPTWVNRLARLGSICNCILPEALRISGVGHDPNYEAEDSEKRRLRSGLNCLSSISMRQKHLSTSSLFLQSPLRGCLSSSWPSWELRKSLKER 258
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g03084 258 Gene3D PPPDE domains 48 193 IPR042266 -
Vimu1g03084 258 PANTHER DESUMOYLATING ISOPEPTIDASE 50 230 IPR008580 GO:0008233
Vimu1g03084 258 SMART DUF862_2a 52 190 IPR008580 GO:0008233
Vimu1g03084 258 ProSiteProfiles PPPDE domain profile. 52 189 IPR008580 GO:0008233
Vimu1g03084 258 Pfam PPPDE putative peptidase domain 53 187 IPR008580 GO:0008233
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vimu1g03084 Vimu-Chr1 43281216 43283214 Dispersed/Transposed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g03084 1 43281216 43283214 Vimu1g03084 1 43281216 43283214 ECH