Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g03083 ATGGTGGGTCGGAGAGACGCATTGCTCACCAGAGATAAAGCCCAATCATCCGTCGAATCTCGAATCGTCGCCGCCGTCGTCGTCGGCGTTCTCATCGGCTGCGTCTTCGCCTTCTTGTCTCCCAATGGCCTCTTCACCGCCGCTCCCACAACTCTCATTCGCCACCCCAAGACGGTTTCATCTGCGTGCGAATCTCCAGAGCAAGTTAATGCGCTTAAAGTTGATATTCTATCAGCAAAAGAGAAAAATTCCGAGCTGAAGAAGCAGGTGAAGGATCTTATGGAGAAGCTGCGTTTGGCTGAGCAAGGAAAGGGCCATGCACAGGAACAATTTCTTGTTCTTGGTGAAAGACACAAGGCTGGGCCCTTTGGAACCGTCAAGGCTCTCAGAACCAATCCACCCGTCATTCCTGATGAATCTGTGAACCCCAGATTAGCCAAAATCTTGGGGGAAGTTGCTATTTATAAAGAGATAATCGTTGCCCTTGCTAACTCTAATGTGAAGGAGATGTTGCAGCTATGGTTCACCAACATCAAGAAGGCTGGCATTCCTAATTATTTGGTTGTTGCCTTAGATGATAACATTGAAGAGTTCTGCAAATCCAATGATGTTCCTGTGTATAGAAGAGATCCTGATCAAGGTGTTGATGCAGTCGGGAAGATTGGTGGTAACCATGCTGTTTCGGGATTGAAATTTCGTGTTTTGAGAGAATTTCTGCAACTGGGTTACAGTGTTCTCCTCTCGGATGTTGACATTGTGTACTTGCAGAACCCGTTTGATTATCTCTATAGGGATTCAGATGTGGAATCTATGTCTGATGGTCACAATAACATGACAGCTTACGGGTATAATGATGTCTTTGATGAACCCTCAATGGGTTGGGCTCGGTACGCTCATACCATGAGAATATGGGTTTATAACTCTGGTTTCTTTTACATAAGGCCAACTATTCCTTCAATTGAGCTCTTGGATCGTGTTGCTAACCGGCTATCCAATGACCCAAAAGCGTGGGATCAGGCTGTTTTCAACGAGGAGCTCTTTTTCCCTTCTCATCCTGGTTACGAAGGACTTCATGCTGCAAAAAGGACGATGGATATGTACCTTTTTATGAACAGTAAGGTTCTCTTTAAGACTGTCAGAAAAGATGCTAAACTCAAGAAGCTGAAGCCTGTGATTATACATGTTAATTACCATCCAAACAAGTTTGAGAGGATGAAGGCAATAGTTGAATTCTATGCCAATGGGAAGCAGGATGCGCTGGACCATTTCCCAGATGGTTCCGATTGA 1287 0.4507 MVGRRDALLTRDKAQSSVESRIVAAVVVGVLIGCVFAFLSPNGLFTAAPTTLIRHPKTVSSACESPEQVNALKVDILSAKEKNSELKKQVKDLMEKLRLAEQGKGHAQEQFLVLGERHKAGPFGTVKALRTNPPVIPDESVNPRLAKILGEVAIYKEIIVALANSNVKEMLQLWFTNIKKAGIPNYLVVALDDNIEEFCKSNDVPVYRRDPDQGVDAVGKIGGNHAVSGLKFRVLREFLQLGYSVLLSDVDIVYLQNPFDYLYRDSDVESMSDGHNNMTAYGYNDVFDEPSMGWARYAHTMRIWVYNSGFFYIRPTIPSIELLDRVANRLSNDPKAWDQAVFNEELFFPSHPGYEGLHAAKRTMDMYLFMNSKVLFKTVRKDAKLKKLKPVIIHVNYHPNKFERMKAIVEFYANGKQDALDHFPDGSD 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g03083 428 SUPERFAMILY Nucleotide-diphospho-sugar transferases 159 370 IPR029044 -
Vimu1g03083 428 Coils Coil 69 103 - -
Vimu1g03083 428 Pfam Nucleotide-diphospho-sugar transferase 183 405 IPR005069 -
Vimu1g03083 428 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Vimu1g03083 428 PANTHER ARABINOSYLTRANSFERASE RRA3 10 428 IPR044290 GO:0016757|GO:0080147
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g03083 Vimu-Chr1 43270224 43272957 Dispersed/Wgd