Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g03082 ATGCCATCTAATTACTTATCGAGGCTTGGAGCTTCAATTCAGAGATCGGTTGTGGGGAAAGAAAGGGGAATACTGGACTCCGCTGAAATTCTGATTGGGCAAGGAAAGCTGTGGTTTGGTAGTTCCAAGTTCTTTCATTCTGTGCATAGTTCATATTGTGTGGAACTTAGCCTGCTCGTGCGCCCTGGCGTTGCCTTAGCTTCCAGCTCTGAATTGGTTGGAAAAAAAAGAACTTTGTCTGTGGTTGACACACTGTCTCGGACATTTTCGGTTCCGTCTGTGTCGGGGCCGTCGTTTCAGGTCTGTGGATACCACATTGGTTCTGCCCTTGCCGGCCCTGATCAGTTTTCTAGTGGTGGAACTGGATTTCGTATTAAGGCAATGGCTGCTCACTTGCCCGGGGTAGTGGTTGGTGAATCTTATGTAGACAACCCGAGTTTGAAGGGTGTTCGCCGATCAGTGTCAACCAAGAGGATTGGTAGTATATGTTTAAACACGAATTTGAGGAATGGTGGAAAAGTGAGCATGAGTTTGAAAAAGCATCAGCGGCCAGATAACAGTGCGATTTATGGATATTTTATTTATAATGCTGCCAAGACCTTGTATAATTCTCACCCTTACATGCAGTCAGGATCTGGAGCTTTCCATAGCTTGTCAAACTCGTGTTACTCAGTTGGGCCTGCTCATGACGTACCTTTTGACACTTCTGTCCGTGAGGAACAGTCAAGCAGTTCCGCAGATTCATCTGAACAGAAAACTCCTTCAGGGAAGACCCTTAAGTTAGTATCAGGATCATGCTACTTGCCTCATCCTGATAAAGAAGAAACCGGTGGAGAAGATGCTCATTTTATATGTTCTGAGGAACAAGCAATAGGGGTGGCAGATGGTGTTGGTGGATGGGCAGATCTTGGTGTTAATGCTGGATATTACTCTCGTGAGCTAATGTCCAAATCAGTTGAAGCTATTCAGGAGGAGCCCAAAGGTTCAATTGATCCAGCTAGGGTGCTGGAAAAAGCACACTCAAGTACAAAAGCTAAGGGTTCCTCTACCGCATGCATCATTGCACTTACTGATCAGGGCCTTAATGCTATCAATTTAGGAGACAGTGGGTTTATGGTAGTCCGAGATGGGTGCACCGTATTCCGATCCCCAGTGCAGCAACATGATTTCAATTTCACCTATCAGCTGGAATGTGGTAGGAATGGTGATTTACCTAGTTCTGGTCAGGTTTTTACCATTCCTGTTGCACCTGGCGATGTCATAGTTGCTGGTACAGATGGGCTGTTTGATAACTTGTACAATAATGAGATTACGGCAGTGGTGGTTCACGCCATGAGAGCGGGATTAAGTCCTCAAGTTACAGCCCAGAAGATAGCTGCATTGGCACGTCAACGGGCACTTGATAAAGACAGACAGACTCCTTTCTCAACCGCTGCTCAAGATGCTGGTTTCCGTTACTACGGTGGCAAGCTTGATGATACCACAGTTGTAGTTTCATACGTTACCGGCTCAGCAGACGCATAA 1524 0.4606 MPSNYLSRLGASIQRSVVGKERGILDSAEILIGQGKLWFGSSKFFHSVHSSYCVELSLLVRPGVALASSSELVGKKRTLSVVDTLSRTFSVPSVSGPSFQVCGYHIGSALAGPDQFSSGGTGFRIKAMAAHLPGVVVGESYVDNPSLKGVRRSVSTKRIGSICLNTNLRNGGKVSMSLKKHQRPDNSAIYGYFIYNAAKTLYNSHPYMQSGSGAFHSLSNSCYSVGPAHDVPFDTSVREEQSSSSADSSEQKTPSGKTLKLVSGSCYLPHPDKEETGGEDAHFICSEEQAIGVADGVGGWADLGVNAGYYSRELMSKSVEAIQEEPKGSIDPARVLEKAHSSTKAKGSSTACIIALTDQGLNAINLGDSGFMVVRDGCTVFRSPVQQHDFNFTYQLECGRNGDLPSSGQVFTIPVAPGDVIVAGTDGLFDNLYNNEITAVVVHAMRAGLSPQVTAQKIAALARQRALDKDRQTPFSTAAQDAGFRYYGGKLDDTTVVVSYVTGSADA 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g03082 507 MobiDBLite consensus disorder prediction 236 257 - -
Vimu1g03082 507 Gene3D - 271 400 IPR036457 -
Vimu1g03082 507 SMART PP2C_4 252 499 IPR001932 -
Vimu1g03082 507 Pfam Stage II sporulation protein E (SpoIIE) 290 500 IPR001932 -
Vimu1g03082 507 Gene3D - 404 505 IPR036457 -
Vimu1g03082 507 ProSiteProfiles PPM-type phosphatase domain profile. 265 501 IPR001932 -
Vimu1g03082 507 PANTHER PROTEIN PHOSPHATASE 2C 225 503 IPR039123 -
Vimu1g03082 507 SMART PP2C_SIG_2 274 501 IPR001932 -
Vimu1g03082 507 FunFam 5-azacytidine resistance protein azr1 270 395 - -
Vimu1g03082 507 MobiDBLite consensus disorder prediction 237 257 - -
Vimu1g03082 507 SUPERFAMILY PP2C-like 266 499 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g03082 Vimu-Chr1 43264060 43267523 Dispersed/Wgd