Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g03061 ATGGATCCTGAAATCTCGTCTTCAACCCGATTAGCATTCACTTTCCGGATTGTGTTCCTTACCTGGAATTACTTCGTAGCTAGAGATGGTAACTCTCAGAGAGGAAGAGCGCCATCTGAGTTTCCTTGCCTAACAGATATGGACCTAGACAGAATCAGTTACTTACCGGGTCATGTAATAGACCAAATTTTGTCACATTTGTCAATTAAGGAAGCAGTGAGAACAAGTGTTTTGTCTAGCAAATGGAGGTACAAATGGGCCACGCTACCGAATCTTGTGTTCGATAACCAATTTGTCTGTGTGGCTGCTCAGGACCATATGATTGTAAAGAACAAGTTTTTGAGAACTGTTGATCATGTTCTGCTACTTCATTCCGGGCCAATTAACAAGTTCAAACTCTCCCATCGTGATCTCCTTGGTGTGATTGATATTGATCGTTGGACGCTTCATGTATCCAGAAAGGCTGTTAAAGAGTTTGTGCTGGAAATCTGGAAAGGACAGCGGTATAAGATACACTCGTGTTTATTTTGTTGTCAAAGTTTGACTCATTTAGAATTGTTTAATTGTTGGCTTAAACCTCCATCTACATTTAAAGGCTTCAAGAACTTAAAGAGTCTTGATCTGCAACATGTTACCTTGGCTCAGGATGCTTTTGAAAATTTGATATCCAGCTGTCCAATGCTTGAACGGTTGACATTGATGAACTTTGATGGTTTCACTCATCTTAATATTGATACACCGAATCTCCTGTTTTTTGACATTGGGGGTAAATTTGAAGATATTAGCTTTGAGAGTACTTTCCAATTAGCTGTGGTATCAATTGGTTTATATGTGAACTTTGAAATCAATCAAAGTAGATTTCGTGGAAGCTATAGCAATTTGCTCAAATTTTTTGTTAATCTTCCGAACCTGCAAAGGCTAGAGATTCAGAGCTATTTTTTAAAGTATTTGGCAGCGGGGGTTGTGCCAATAAATCTTCCAAGACCGTGCATTGATCTAAGTTATCTTTCTATACGAATAAACTTAAATGATTTGAAGGAAATCTCAGCTGCTCTTTGCCTACTAAGAAGCTCCCCTAATCTACAAGAACTAGAAATATTGGTAACTCTAGAATTTTCAAATCAGTTCAGTGTTGGACATTTGGGTGTTGCTGAAATGGTTGCAATTGTGAATTGTGATGGCATGCAGGCTCGACAGGAGGAGCAGACTCTTATGATAACGCACAACTATTGTTGGGAAGATGTGTTTTTTTCTTGTCCAGAAATGCGTATGAGAAAAGTGAAGATAGATGGCATATCTGGTATCAAACCTGAACTGGATTTTATCAGCTTTCTACTTCTACACTGTCCTATGTTGGAAAGGATGACTGTGATTCCTGTTTCAAACATAGGAACAGAACTGATGAGACAACTGTTGCGGTGTAGGAGAGCCTCAAGACAAGCTGAAATCCTTTACCTAGACTCTTAG 1467 0.3899 MDPEISSSTRLAFTFRIVFLTWNYFVARDGNSQRGRAPSEFPCLTDMDLDRISYLPGHVIDQILSHLSIKEAVRTSVLSSKWRYKWATLPNLVFDNQFVCVAAQDHMIVKNKFLRTVDHVLLLHSGPINKFKLSHRDLLGVIDIDRWTLHVSRKAVKEFVLEIWKGQRYKIHSCLFCCQSLTHLELFNCWLKPPSTFKGFKNLKSLDLQHVTLAQDAFENLISSCPMLERLTLMNFDGFTHLNIDTPNLLFFDIGGKFEDISFESTFQLAVVSIGLYVNFEINQSRFRGSYSNLLKFFVNLPNLQRLEIQSYFLKYLAAGVVPINLPRPCIDLSYLSIRINLNDLKEISAALCLLRSSPNLQELEILVTLEFSNQFSVGHLGVAEMVAIVNCDGMQARQEEQTLMITHNYCWEDVFFSCPEMRMRKVKIDGISGIKPELDFISFLLLHCPMLERMTVIPVSNIGTELMRQLLRCRRASRQAEILYLDS 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g03061 488 Gene3D Ribonuclease Inhibitor 152 488 IPR032675 -
Vimu1g03061 488 Pfam F-box domain 53 84 IPR001810 GO:0005515
Vimu1g03061 488 PANTHER F-BOX PROTEIN-LIKE 50 462 - -
Vimu1g03061 488 SUPERFAMILY F-box domain 48 95 IPR036047 GO:0005515
Vimu1g03061 488 SUPERFAMILY RNI-like 170 373 - -
Vimu1g03061 488 Pfam Leucine Rich Repeat 202 226 IPR013101 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g03061 Vimu-Chr1 43048914 43051378 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g03061 1 43048914 43051378 Vimu1g03061 1 43048914 43051378 ECH