Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g03055 ATGTTCCAGAACAAGAGTGTCTCGATCTCCTTGTCGGACGAGGAATCCGACGAGCTGGGTCGGATGCGGGTCCGCGCGCGACGGAAGCGCAAGAAACTCGGCAACAGAAGATTGCTCCGGAAGCTGTTCGTCAGATACTGGATGCTGCTCGTCATTGTTCCAGCTGCGGGATTGTTCATATTCGAGGCCACCAGAATTGGGCGAAGCTTGAATGGTTTAAACACGAACAACAGCATAGAAACACGCACTCACAGAATAGATGGATCTAGTCCCACATTGCGGAAGGCCCCCACCAACTTGAATCGCCTCGATCCTACCACACATGTTGTGGCTGGCATCAGAGAGCTGATTGAATATGCTTCCGCTAATGCTTGGTACTTAATAGTGTTGTGTATATTGAAATGTGGTTGCTTGAAGCTCCTACCTCCTGAAAATCTTGATCAGCTAGATATACCTGTGGAACAAGAATCTTCTAGAATTCCTGTTGGAGAGGTTTTATACATGTCAGAGAGTGATAGGTCTTTTGTAGGTGTGAATGTTACGTTGTCTCAATTGCGTACAGAGGACACACGGTTTAATTTATTTACTGGAAATCAAACATTTGAGGAGAGAGATAGAAGTTTTGAGGTGAAAGAAACTATGACGGTACATTGTGGGTTTTTCGGTGTGAATGGTGGGTTTAAGATATCTGATCAAGATAAAAGTTACATGCAAGGTTGCAAAGTCGTGGTATCTACTTGTGCATTTGGTGGTGGAGATGATCTCTATCAGCCAATTGGAATGTCTCAGGCTTCCCTTAAGAAGGTTTGCTATGTTGCATTCTGGGATGAAATCACCGTCAAAGCGCAGGAGTTGGTGGAGCGTAGAATCGGGGAAAATGGCTTTATTGGAAATTGGCGTGTTGTTGTTGTTCGAGATCTTCCTTTTGCCGATCAAAGGTTGAATGGTAAAATTCCCAAGATGTTAAGCCATCGGCTTTTTCCTCAAGCTAAATACTCAATTTGGGTAGACTCTAAGTCCCAATTCCGGAGAGACCCACTAGGTGTGTTGGAAACACTCCTTTGGCGCCCAAAATCTTTGCTTGCCATATCAGAACATGGAGCTCGGAGTAGTGTCTACGATGAGGCTAAGGCTGTTGTCAAGAAGAACAAAGCCAAGCCAGAGGAAGTTGAAGTGCAACTGAATCAATACAGAAAAGATGGCTTGCCGGAAGACAAGAGATTTAATGGGAAAAAAGCTCTATGTGAAGCCTCTGTTATCATCAGGAAGCATACACCCCTAACTAATCTATTGATGTGCGTCTGGTTTAATGAGGTGGTTCGTTTCACTTCTAGGGATCAGCTCAGCTTCCCTTATGTCCTGTGGAGGCTGAAAGCTTTCCAAAACATCAATACTTTTCCTGTTTGTACTCGCAAAGATCTTGTCAATAGTATGGGCCATGTCCGCAAGGCCAAACCTTTGCAAAGCTGA 1470 0.4469 MFQNKSVSISLSDEESDELGRMRVRARRKRKKLGNRRLLRKLFVRYWMLLVIVPAAGLFIFEATRIGRSLNGLNTNNSIETRTHRIDGSSPTLRKAPTNLNRLDPTTHVVAGIRELIEYASANAWYLIVLCILKCGCLKLLPPENLDQLDIPVEQESSRIPVGEVLYMSESDRSFVGVNVTLSQLRTEDTRFNLFTGNQTFEERDRSFEVKETMTVHCGFFGVNGGFKISDQDKSYMQGCKVVVSTCAFGGGDDLYQPIGMSQASLKKVCYVAFWDEITVKAQELVERRIGENGFIGNWRVVVVRDLPFADQRLNGKIPKMLSHRLFPQAKYSIWVDSKSQFRRDPLGVLETLLWRPKSLLAISEHGARSSVYDEAKAVVKKNKAKPEEVEVQLNQYRKDGLPEDKRFNGKKALCEASVIIRKHTPLTNLLMCVWFNEVVRFTSRDQLSFPYVLWRLKAFQNINTFPVCTRKDLVNSMGHVRKAKPLQS 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g03055 489 PANTHER ALKALINE CERAMIDASE-RELATED 9 486 IPR006852 -
Vimu1g03055 489 Pfam Protein of unknown function (DUF616) 186 480 IPR006852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g03055 Vimu-Chr1 42987844 42990531 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g03055 1 42987844 42990531 Vimu1g03055 1 42987844 42990531 ECH