Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g03043 ATGATCCAGAATGGTCTCGACCTTGAGGGCAAGTTCCTGGTGGTTATTGGTGAGGATAGATTGTCTATGTGGGAGATGGAGGCAACATCTTCTAGGCTATCAATGGGGGACTTGTGGAGGTTCGTCTACACTATCAGAACAATTCAAGGGTCCCTCATTGTTTCTTCTTTTGTCAATATCTTCCTTGGGTTTAGTAAGACATGGGGAAATTTGGCAAGGTTGTTTAGTCCCATAAGCATTGTACCTGTGGTATGTGTGGTGGGTCTTGGTCTGTTCTCCAGGGGCTTTCCATTGCTTGCAAATTGTGTGCAGATTGGCTTACCTATGCTCATTCTACTTGTAATAACACAACAGTATTTGAAGCGTCTTCATCATGCTGCACATCATGTACTTGAGAGGTTTGCTTTACTTCTCTGCATTGCTGTCATCTGGGCATTTGCTGCTATCCTTACTGTTGCAGGTGCATATAATACTGCTAAAACACAGACCCAAGTGAGTTGTCGCACAGATCGCTCATACCTTATGTCTTCTGCTCCGTGGATTAAAGTCCCATATCCATTCCAGTGGGGTACCCCCATATTCAGAGCCAGTCATGTCTTTGGGATGATGGGGGCTGCACTTGTCTCTTCTGCTGAGTCAACTGGTGCTTTCTTTGCTGCAGCCAGGCTTTCTGGTGCAACACCACCTCCTGCACATGTGCTTAGCCGAAGCATTGGGTTTCAGGGCATTGGCATGCTGATTGAAGGCATATTTGGTTCCGTTGTTGGTACTACTGTATCTGTTGAAAATGTGGGCCTACTTGGTCTAACACATATAGGGAGTCGCAGAGTCGTGCAGATATCATGTGGTTTCATGATCTTCTTTTCTATTTTTGGGAAATTTGGAGCCTTTTTTGCTTCGATTCCCCTACCGATATTTGCTGCTATATACTGTGTTTTGTTTGGTATTGTGGCTGCTGTTGGAATTTCTTTTATACAGTTTGCAAATACCAACTCCATAAGAAATATCTATGTTCTGGGCATAACCTTGTTTCTAGCAATATCAGTTCAACAATATTTTGTCAATAACACTGCACCAGATGGTCATGGTCCAGTTAAAACAGATGGTGGATGGTTTAATGACATTTTGAACACCATATTCTCTTCTTCCCCAACTGTGGCTATAATTGTTGGGACCCTTATTGACAACACACTTGAAGGAAAATCTAAAGCTGTGGACAGAGGACTTCCATGGTGGGTTCCTTTTCAGAATAGGAAGGGAGATGTTAGAAATGACGAGTTCTACCGTCTACCTCTCAGGATAAATGAGTATATGCCCACCAGATTTCTCTGA 1332 0.4332 MIQNGLDLEGKFLVVIGEDRLSMWEMEATSSRLSMGDLWRFVYTIRTIQGSLIVSSFVNIFLGFSKTWGNLARLFSPISIVPVVCVVGLGLFSRGFPLLANCVQIGLPMLILLVITQQYLKRLHHAAHHVLERFALLLCIAVIWAFAAILTVAGAYNTAKTQTQVSCRTDRSYLMSSAPWIKVPYPFQWGTPIFRASHVFGMMGAALVSSAESTGAFFAAARLSGATPPPAHVLSRSIGFQGIGMLIEGIFGSVVGTTVSVENVGLLGLTHIGSRRVVQISCGFMIFFSIFGKFGAFFASIPLPIFAAIYCVLFGIVAAVGISFIQFANTNSIRNIYVLGITLFLAISVQQYFVNNTAPDGHGPVKTDGGWFNDILNTIFSSSPTVAIIVGTLIDNTLEGKSKAVDRGLPWWVPFQNRKGDVRNDEFYRLPLRINEYMPTRFL 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g03043 443 Pfam Permease family 43 353 IPR006043 GO:0016020|GO:0022857|GO:0055085
Vimu1g03043 443 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 33 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g03043 Vimu-Chr1 42834363 42838832 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g03043 40 439 Organic Solute Cotransporters AT2G34190 59.750 1.41e-180 513
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g03043 1 42834363 42838832 Vimu1g03043 1 42834363 42838832 ECH