Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vimu1g03033 | ATGTTGTCAAGAAAAACTGTTGTGTGGTTGATGTTTTTGTGTTGGTGGCAGTTTGGCATATCATGCGAGGGGAACAAACAAGGGGAATATCTGTACAGGTTAATTCGATCAAAGAGGAGTGGTGAGAAAGTGATCTCATCAGAAAAAGCTTCAGTGGTCGGAAATGGTGGTGATGAAGATTTATGGAAGGTTGAAGAAGAAAGGGTGTTGATGGAAGATGACAGAGTGAAGGGTTTACCAGGAGAACCAGAAGGTGTGGATTTTGATCAGTATGGTGGCTATGTAACTGTGGATGACAAAAGAGGAAGAAGATTGTTCTATTACTTTGTAGAGTCACCTCAAAATGCTTCTAACAAGCCCCTCCTTCTATGGCTCAATGGAGGTAACTATTTCTTATATTTTCTTTCTTTCAACATAGTATCAAATAATCAAACCCAAGATCGTGATTAA | 450 | 0.3933 | MLSRKTVVWLMFLCWWQFGISCEGNKQGEYLYRLIRSKRSGEKVISSEKASVVGNGGDEDLWKVEEERVLMEDDRVKGLPGEPEGVDFDQYGGYVTVDDKRGRRLFYYFVESPQNASNKPLLLWLNGGNYFLYFLSFNIVSNNQTQDRD | 149 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vimu1g03033 | 149 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 22 | - | - | |
| Vimu1g03033 | 149 | Gene3D | alpha/beta hydrolase | 69 | 135 | IPR029058 | - | |
| Vimu1g03033 | 149 | SUPERFAMILY | alpha/beta-Hydrolases | 71 | 142 | IPR029058 | - | |
| Vimu1g03033 | 149 | Pfam | Serine carboxypeptidase | 80 | 128 | IPR001563 | GO:0004185|GO:0006508 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vimu1g03033 | Vimu-Chr1 | 42759570 | 42760019 | Transposed |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Vimu1g03033 | 1 | 42759570 | 42760019 | Vimu1g03033 | 1 | 42759570 | 42760019 | ECH |