Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g03026 ATGTTTCGAATCCGTAACAGAACGCTGCCACTTCTTCGCCACCATCTTCCTCGAACAATTTCTTCTTCGACAAAAGCTTGCAATTCAACAAAGAAAAGCGTAGAGAATTCTCAAATTGCACCAATCCTCGCTCACAGCCACAACCTCTCTCCTATCGCTCCGCAATCTTCCTCTCGGGCTCACGTCCTCGCGCTCTCTGCCGCCGCCATTCTCACCTCCGCCGCCTTCCTCAACTCCGACTACGTCCGCCAAGAATCCGATCGCCGCGGAGAACCCAATCCTCTCTACGCGAGAGCCGAGAACGCCACGCGCAAGGCGGCGGACTCCTTCGACCGGATTTTCCACCACGCCAGGCGCACGGGCGTCGCTGCTGCGGTCCTCTGGCACTCTCTGTGCTCGGTGCTGTCGTCGGCAAACCATGAGGTGCGCTCCGGATTCGAGATTCGCGTTGCGGCTTTGCTCGCCGATATCGCTGCCGCGAACTCCGGCCGTAGGGCTGCGATCGTCGGGGCAGGTGGCGGCGCTGTCGTGGACTGGCTGCTGGAGGCCGTGACAAAAGAAGGCGGCGGAGGCGGCGGCACTCAGGCGGAGGCCGCGAGGGCCCTTGCTTATCTGATTGCGGACCCTAACGTGTCTGCGGTGGTGCTTGGGAGACCTCACGCGGTTCCGAATCTTCTGAGGTTCATCTTTTCGTGTCAGCCTCGGCGTTCTAAGAATAAGAAGCAGCATTCAAGACGTAGTGCATTTGATATTTCTGATTCTTTGAAAGGCAGGAGCATGCTTGTGGCTGCCATTATGGATATCGTTACGTCAAGCTGTGACAATACACAAGACGTGTCTTTTAATCCATCATTGCCTGGAAATGCTGAAACTAGAGACATTGCTGCTGCCCTACAAGTAATTGAGGAAGGGGGTTTGCACTTGGATGAGCCACCTGAAGGTGAAGATGATGATGGTGGGACCGGAAGCAAAGGGATTGGGATCAAGATACTTGAAGGTACCCCTGTTTTAGGGCTTTCAAGGACCAGCAGTGATTCATATAGTGAAGAATTGAAGCATCAAACTTCTAAAACTATCAAATATCAAAATAAGTACGACAATTCTCGGCAACAAAATAATGTATCCTCTTCTGTTGTTCCTGGTCTCTGGGATGATTTACACTGTGAACATGTTGCTGTTCCTTTTGCCACATGGGCATTAGCAAATTGGGCAACAGCATCAGAATCAAATAGAACTCGTATTCAGGAACTGGATCGAGATGGACAGGCAGTCATGGCTGCTTTAATGGCACCCGAGAGATCTGTAAAATGGCATGCAAGTTTGGTGGTGAGGTTGCTATTAGAAGATCGCAATGCACCTTTGAATGAATCTATTTCTGAATGGGCTTCGAGTATTCTTTCTACTATATCTCAGGCATCCAAGCATGAAGATGTTTCTTTGGCTAATATAGCTTTATCTGCCCTTCTCTTATCTGTTGAGAGGAGCCCTGCAGTGCAGAATATACTGATGGAGAATGGTCTTAACCCAATGAGAGAAATCGCCAAGCAGATGACAAAACATAAGCAGGTGCAAGAAGCAATGGCAAAGGCATTAGAGCTACTTTGTACTGGAGAGCTGCACTTGTCGCTTGAAGAGGGTCAAAAATGGTCAGGCATTCTTGTACCTTGGGTTTTTGGAACATTTTCCTCTGATACTATACGATCTTCAGCCATAAAGATTCTTTCTCAGATCATGGAAGACTACGGTCCAACATCTGTACCACTTTCTCAAGGATGGTTAGCCGTGATGCTATCTGAAGTGCATAGTTCTATCAAGAAGTCAAATGATAATGGAACCAATCAACCAAAAAGTGATAATGTAAAGACATTAATCAATAATGCGAATATTGCTTCTGCTGCACAAGTTGCCAGTCAACTATCCACTGCTGTTGTTAATCTGGCAGCTAAAAGAATGGGAGTTGCATCTAATTCTGGGGATGCATCCCCACTGGCAGATTTTCTGTCTCTGGAAACTTTAGCTGGACCATTTAAAAATTTAAAAAAAGATAATTTGCCTAAATTAGATGCTGCAGATTCTGCTGTGGCAACGCTGAAAGGAATTAAAGCTCTGACTGAAGTTTGTGCTGAAGATTCTGGTTGTCAGGACATGATAGTTGATTTTGGGATTTTATGTTTGCTGAGGCGCTTTATGTTGAGTGATGATTATGAGAAACTGGCTGCTATTGAGGCTTATGATGCATCATCTAGAGCACATGAGGGGAAGGAGCGGATATCAAATGTAGATTACAAACCACCTGCATCAGATGTATATAATTCAGCCAGTGTCCGAGTTCCACCCACTGCTCATATCCGCAAGCATGCAGCTCGGTTATTGACCATCCTCTCACTGCTTCCCAAAGTCAAGAAGGTCATCACAGCTGATGAAACATGGTGCAAATGGCTTGATGATTGTGCTAATGGCCGAATTCCAGGTTGCAATGATCTTAAAATTCAAAGCTATGCCAGAGCAGCACTTTTAAACGTGTTTTGCAATGACCAGCCCAATGGAAGGAGTGGAAGTGGAGGTCCTTCTGACGGTGGTGTAAAAAGTTATAGGAATGCATGTCCTCGTTATGATGACATGATATTCTTGATAAATTCTCATCTTCCCCACTGGAAATGTCCCAAAGAAACAGGTCAACAAGAACCACTCTCAAGAATGATATCTCTGGCTCCTTCTACCGATACTGAAAATGGAACAGAGTCCTTGAATAACAGCAACTGCTCTATTTCTAATGATTCAACTAAAATCAACCCAGATAGAAATTTGCCTCCACTAGACATAGTTTTTGTCCATGGGCTCCGTGGTGGGCCTTACAAAACTTGGCGTATAGCTGAGGAAAAATCCTCAACTTCTTCACATTTGGTCGAGAAGGTTGACGAGGAAGCAGGAAAGCTTGGAACCTTTTGGCCTGGTGAATGGCTTTCTAGTGATTTTCCTGAGGCTCGGTTGTTTACCCTAAAATACAAGAGTTTGTTTCATGCGTGGTTCCCTTTACCTCCATCTAATTCTTTAGGTAAATGCTTTATGCAGACTAATCTCACACAGTGGTCGGGAGCTAGCTTGCCTCTTCAGGAGGTTAGTTCTATGCTATTGGAGAAGCTTGTTGCTGCAGGGATTGGGGATAGACCTGTTGTTTTTGTTACTCACAGTATGGGAGGTCTGGTTGTGAAGCAAATTCTTCATAAAGCAAAGGAGGAAAGATTAGATAATCTTGTGAAGAATACAATGGGAATTGTTTTTTATAGCTGCCCACATTTTGGTAGCAAACTTGCAGATATGCCTTGGCGAATGGGCTTCGTGCTTCGTCCAGCTCCCACAATAGGAGAGCTAAGAAGTGGATCTCAAAGACTGATAGAGCTTAATGACTATATTCGTCAACTTCATAAGAAGAGGTTGCTTGATGTTCTCAGCTTTTGTGAGACCAAGGTAACTCCAATAGTTGAAGCTTATGGTGGATGGGCCTTTCGAACAGAAATTGTACCAATTGAGTCAGCATATCCCGGATTTGGGGAATTAGTCGTATTGGAGTCAACAGATCATATAAATTCTTGTAAGCCAGTGAGCCGCTCAGACCCTTCGTATACGGAGACGTTAAAGTTCTTGCAGAGAGTAAAAGTATGCCTTGACTCGGCTTATGCTTCCGGAGAGGAGCTTAGCTAG 3702 0.4568 MFRIRNRTLPLLRHHLPRTISSSTKACNSTKKSVENSQIAPILAHSHNLSPIAPQSSSRAHVLALSAAAILTSAAFLNSDYVRQESDRRGEPNPLYARAENATRKAADSFDRIFHHARRTGVAAAVLWHSLCSVLSSANHEVRSGFEIRVAALLADIAAANSGRRAAIVGAGGGAVVDWLLEAVTKEGGGGGGTQAEAARALAYLIADPNVSAVVLGRPHAVPNLLRFIFSCQPRRSKNKKQHSRRSAFDISDSLKGRSMLVAAIMDIVTSSCDNTQDVSFNPSLPGNAETRDIAAALQVIEEGGLHLDEPPEGEDDDGGTGSKGIGIKILEGTPVLGLSRTSSDSYSEELKHQTSKTIKYQNKYDNSRQQNNVSSSVVPGLWDDLHCEHVAVPFATWALANWATASESNRTRIQELDRDGQAVMAALMAPERSVKWHASLVVRLLLEDRNAPLNESISEWASSILSTISQASKHEDVSLANIALSALLLSVERSPAVQNILMENGLNPMREIAKQMTKHKQVQEAMAKALELLCTGELHLSLEEGQKWSGILVPWVFGTFSSDTIRSSAIKILSQIMEDYGPTSVPLSQGWLAVMLSEVHSSIKKSNDNGTNQPKSDNVKTLINNANIASAAQVASQLSTAVVNLAAKRMGVASNSGDASPLADFLSLETLAGPFKNLKKDNLPKLDAADSAVATLKGIKALTEVCAEDSGCQDMIVDFGILCLLRRFMLSDDYEKLAAIEAYDASSRAHEGKERISNVDYKPPASDVYNSASVRVPPTAHIRKHAARLLTILSLLPKVKKVITADETWCKWLDDCANGRIPGCNDLKIQSYARAALLNVFCNDQPNGRSGSGGPSDGGVKSYRNACPRYDDMIFLINSHLPHWKCPKETGQQEPLSRMISLAPSTDTENGTESLNNSNCSISNDSTKINPDRNLPPLDIVFVHGLRGGPYKTWRIAEEKSSTSSHLVEKVDEEAGKLGTFWPGEWLSSDFPEARLFTLKYKSLFHAWFPLPPSNSLGKCFMQTNLTQWSGASLPLQEVSSMLLEKLVAAGIGDRPVVFVTHSMGGLVVKQILHKAKEERLDNLVKNTMGIVFYSCPHFGSKLADMPWRMGFVLRPAPTIGELRSGSQRLIELNDYIRQLHKKRLLDVLSFCETKVTPIVEAYGGWAFRTEIVPIESAYPGFGELVVLESTDHINSCKPVSRSDPSYTETLKFLQRVKVCLDSAYASGEELS 1233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g03026 1233 MobiDBLite consensus disorder prediction 307 326 - -
Vimu1g03026 1233 Gene3D alpha/beta hydrolase 937 1148 IPR029058 -
Vimu1g03026 1233 SUPERFAMILY alpha/beta-Hydrolases 940 1217 IPR029058 -
Vimu1g03026 1233 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 3 1221 - -
Vimu1g03026 1233 SUPERFAMILY ARM repeat 131 733 IPR016024 -
Vimu1g03026 1233 Gene3D - 342 587 IPR011989 -
Vimu1g03026 1233 MobiDBLite consensus disorder prediction 906 929 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g03026 1 42700600 42707298 Vimu1g03026 1 42700600 42707298 ECH