Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02955 ATGGGAGGTTGGGCAATTGCTGTGCATGGTGGCGCCGGTGTCGACCCTAATCTCCCTCTCGAGCGCCAGGAAGAGGCGAAACAACTTCTCACTCGCTGTCTCAATCTTGGAATCTCTGCTCTGCGTTCCAATGTTCCCGCCATTGATGTTGTCGAACTTGTGGTGAGGGAGTTGGAAACGGATCCGCTCTTCAATTCGGGCCGTGGATCTGCCCTGACGGAAAAAGGAACGGTAGAGATGGAGGCTAGCATCATGGATGGGCCGAAACGGCGCTGCGGCGCCGTTTCAGGTCTTACGACCGTCAAGAACCCTATTTCGCTGGCTCGTTTAGTTATGGACAAATCCCCACATTCATACATCGCCTTCTCTGGAGCTGAAGAATTCGCCAGGCAACAGGGGGTGGAGGTTGTGGACAACGAATACTTTGTCACACCTGACAATGTGGGCATGCTGAAGCTGGCAAAGGAAGCCAACACAATCCTGTTTGATTACCGAATTCCGAACTCGGGGTACGAGACATGTGGATCCGGTGTGGAGAGTCCACTGCAGATGAATGGGCTCCCGATAAGCGTGTACGCGCCGGAGACCGTTGGCTGCGTGGTGGTGGACCGGGAGGGGCGGTGTGCGGCGGCGACGTCAACCGGTGGACTGATGAACAAAATGACCGGTCGAATCGGTGACTCGCCGCTGATCGGCGCTGGGACCTACGCTTGCGAGTTGTGTGGGGTTTCGTGCACGGGTGAGGGCGAGGCCATCATACGTGGCACTCTGGCGCGTGAGGTGGCAGCGGTGATGGAATACAAAAACTTGAAGCTTCATGATGCCGTTGATTTTGTGATCAAACACCGTCTGGATGAAGGAAAAGCTGGGCTCATTGCAGTTTCCAATACTGGTGAAGTGGCTTGTGGGTTCAATTGCAATGGCATGTTCAGGGCTTGTGCCACTGAAGATGGTTTCATGGAGGTTGCAATTTGGGAATAA 981 0.5454 MGGWAIAVHGGAGVDPNLPLERQEEAKQLLTRCLNLGISALRSNVPAIDVVELVVRELETDPLFNSGRGSALTEKGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMDKSPHSYIAFSGAEEFARQQGVEVVDNEYFVTPDNVGMLKLAKEANTILFDYRIPNSGYETCGSGVESPLQMNGLPISVYAPETVGCVVVDREGRCAAATSTGGLMNKMTGRIGDSPLIGAGTYACELCGVSCTGEGEAIIRGTLAREVAAVMEYKNLKLHDAVDFVIKHRLDEGKAGLIAVSNTGEVACGFNCNGMFRACATEDGFMEVAIWE 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02955 326 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 325 IPR029055 -
Vimu1g02955 326 PANTHER L-ASPARAGINASE 4 312 IPR000246 GO:0016787
Vimu1g02955 326 Pfam Asparaginase 4 325 IPR000246 GO:0016787
Vimu1g02955 326 CDD Asparaginase_2 5 318 - -
Vimu1g02955 326 Gene3D (Glycosyl)asparaginase 196 326 - -
Vimu1g02955 326 FunFam Isoaspartyl peptidase/L-asparaginase 196 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02955 Vimu-Chr1 41911556 41913086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02955 6 260 Miscellaneous Gene Families AT4G00590 29.137 5.87e-18 82.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02955 1 41911556 41913086 Vimu1g02955 1 41911556 41913086 ECH
Vimu1g02955 1 41911556 41913086 Vimu10g03270 10 42959934 42962000 PCT