Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02938 ATGCCCTTAAGGCCACGCGAGTGCATTTACTCTCCCTCAATACGCGCGTGCTTTTGCTACAGTGTCCGCGTCACTCTGATGGTGGCTGAGCTTGCTTCTTCTAATTTTGGCGTTAATTTTCACAAGCGAAGCACAATCGCGCAGCGTGTGACTCCACTGCTTCGACAGTTACACTTCTTACTCGGTCAAGCCCCGGCAAATCGTAACGGTCATATTTTCCTTCGCATTTTCAACCTTCCTCGCGAATTAGCAACACCAAATTTCTCTGCACACGCCCGCAATTTTTTCTCTGTTCGAATTCCGTTCAATGCTTCCTGTAGCTTGTTCGTTTTTCAGTTGAATTTTGGAATAAAAATAATGGTGGCTGCGATTTCTACGGCGATAAACCCCAAACGAGCGCAGACTCCAACTCCAAGGAGAACTCCTCTGTTACCTTCTGAATCGGACAATGCACTCGCTCCTCCCCGAAGGCCCAAAGCACGAGAAGTTACTTCTCGCTACATGTCGTCTTCGTCGTCTTCGTCTTCCTCCGTTTCGTCTCCTCCTCGACGATGCCATTCGCCTCTGGTGGTGACAAGGACGATCAATTCTACAAAGCAAACGCCGACGCCGGCGTTGAAGCGCTGTCAGTCGGCGGAGCGCCGGCGACAAGGCACTCCTCGACCTACTCTGACAGAAGCTCCGGCGGCTCAGAAAGTGCTCTTCACTTCCACAAGGAGCTTGTCTGTTTCGTTCCAGGGCGAGTCGTTCCCGATCCAGGTCAGGACAACGAAACCGCCGCCATCACAGAGTTTGCGGAAGAGCACGCCGGAGAGGAGGAAGGTTGCAACGACGCCGACACCGGTGAGAAATGGCAATTCGGATCATGCGGAGAATGGCAGGACGGGGCTAGATCGGCACCGGTGGCCGGCAAAATCACTGCCGCGACCACAACAAGTGAATTGCGTGAACCGCAGCTTGGAATGTGTTGATTCCCCTGGGAGAAAACAAACTGACGTGCCGGAGAACGTTGTTAGGTCATTGCAGAATGTAATGGCGGATGTTCGAGCTTCTCACGACGCGACGCTAGGATCGGAGAGTAACAAAATTAACGGATCTAAGTTTCGGCCTGAAGCTGAGCTTGAGCCTATTGCTTCTGATACCGAAAGTGTAACCTCTGGAAGTTCCTCTGGAGATGGAATTCGAGGTTCCCGAGGGATCGTGATGCCGGCCAGGTTCTGGCAAGAGCATAATAACCGTTTACGGCGCCAAACAGAGGCTCCGTCTTCTAGAAACGGCGTAATTGGAAATAAAGGAACTGTAACTACTGCTCCCAGTCCTAGGATTTTAGTGCAGAAGAAATCAGTGTTGGATTCTGCTGTTTCATCGCCACGTGGAGTTGTGAATAGCCGTGTTGTTCAAGGTTCTCCTATTCGTTCCGCGATTCGTCCTGCTTCTCCGAGTAAACTAGCAACACCTTCTGTGTGGTCTCCTTCGAGAGGAGTAAGTCCGTCACGTGCGCAAAACGGCGTTGCTGGTGGCATTAGTAGTAGGTTCGGAAGTGAACCTTCTGTTCTGAGTTTCGCGGTTGACGTTTCCAGGGGAAAAGTTGGGGAGAATCGGATTGCTGATGCGCATTTGTTGAGACTCTTCTATAACAGGCTCCTCCAGTGGCGTTTTGTTAACGCCAGAGCCGATGCTGCTCTATCTGCGCAGACATTCAATGCAGAGGAAAGCCTCAAATCTGCATGGGTAACTATGTCAAAAATACGAGAATCTGTTAGAGCCAAAAAAACAGAGTTTCAATTGCTGAAGCAACAATTTAAGCTAATAAACATCCTGAAGGATCAAATGTTGTATTTGGAAGATTGGGCTACTTTGGATCGGGTTTACTCTACTTCACTTTCCGGAGCTACCGAAGCCCTAAGGGCTAGCACTCTTCGCCTTCCTGTTGTTGGTGGGGCCAAGACAGATTTGCTAAATTTGAAGGATGCAATTTGTTCAGCAATGGATGTGATGCAGGCAATGGCGTCTTCCATTTGCCTATTGTCACCTAAGGTTGGGCAATTAAATTCGATGGTTGTCGAAGTTGCCAATTTAAGTGCGAAGGAGCGTGTTTTGCTTGAAGAGTGCAAAGACCTTTTATCAGTAATTACAACCTTGCAGGTAAATTTCATATTTTGGTAA 2166 0.4922 MPLRPRECIYSPSIRACFCYSVRVTLMVAELASSNFGVNFHKRSTIAQRVTPLLRQLHFLLGQAPANRNGHIFLRIFNLPRELATPNFSAHARNFFSVRIPFNASCSLFVFQLNFGIKIMVAAISTAINPKRAQTPTPRRTPLLPSESDNALAPPRRPKAREVTSRYMSSSSSSSSSVSSPPRRCHSPLVVTRTINSTKQTPTPALKRCQSAERRRQGTPRPTLTEAPAAQKVLFTSTRSLSVSFQGESFPIQVRTTKPPPSQSLRKSTPERRKVATTPTPVRNGNSDHAENGRTGLDRHRWPAKSLPRPQQVNCVNRSLECVDSPGRKQTDVPENVVRSLQNVMADVRASHDATLGSESNKINGSKFRPEAELEPIASDTESVTSGSSSGDGIRGSRGIVMPARFWQEHNNRLRRQTEAPSSRNGVIGNKGTVTTAPSPRILVQKKSVLDSAVSSPRGVVNSRVVQGSPIRSAIRPASPSKLATPSVWSPSRGVSPSRAQNGVAGGISSRFGSEPSVLSFAVDVSRGKVGENRIADAHLLRLFYNRLLQWRFVNARADAALSAQTFNAEESLKSAWVTMSKIRESVRAKKTEFQLLKQQFKLINILKDQMLYLEDWATLDRVYSTSLSGATEALRASTLRLPVVGGAKTDLLNLKDAICSAMDVMQAMASSICLLSPKVGQLNSMVVEVANLSAKERVLLEECKDLLSVITTLQVNFIFW 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02938 721 MobiDBLite consensus disorder prediction 132 231 - -
Vimu1g02938 721 MobiDBLite consensus disorder prediction 379 393 - -
Vimu1g02938 721 MobiDBLite consensus disorder prediction 483 502 - -
Vimu1g02938 721 MobiDBLite consensus disorder prediction 190 207 - -
Vimu1g02938 721 MobiDBLite consensus disorder prediction 252 307 - -
Vimu1g02938 721 MobiDBLite consensus disorder prediction 476 502 - -
Vimu1g02938 721 MobiDBLite consensus disorder prediction 164 183 - -
Vimu1g02938 721 MobiDBLite consensus disorder prediction 418 440 - -
Vimu1g02938 721 Pfam QWRF family 383 702 IPR007573 -
Vimu1g02938 721 MobiDBLite consensus disorder prediction 252 266 - -
Vimu1g02938 721 MobiDBLite consensus disorder prediction 414 440 - -
Vimu1g02938 721 MobiDBLite consensus disorder prediction 375 397 - -
Vimu1g02938 721 PANTHER AUGMIN FAMILY MEMBER 145 716 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02938 Vimu-Chr1 41710588 41715362 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02938 1 41710588 41715362 Vimu1g02938 1 41710588 41715362 ECH
Vimu1g02938 1 41710588 41715362 Vimu10g03235 10 42758158 42761649 PCT