Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02915 ATGGGAAAGCGTAATTCTCAACGTAAAAATGCTGCAATGTTGGATAGCGACGATGATAGTAGTAGTGTGAGTTCGTCGTCAACTTCGCGAACTGATCACGTCTCCGTCTCAGGGAACGAAGAAGTGCTCTTCGATCAAGACGCTCTCCTTGATCATGCTCTCGATGCCTTGGACGAGAAAAGATTTGCTACTTTATTGCATCTCTGTCTTGCTTCAATAAAGAAGGGAGCCAAAAAAGCATCTGCAAAGGAGATAGCTTTGGCATCACATGTCATTGGTTTGCTGTCTCTGACTGTTGGATATGGTGATAATCGTGCAAGGGAAATATTTGAGGAAACAGCTCGTCCTCTTGATGAATTTCTCACATCCAAATCAGATTTGACAAAAAATCCTTCATTGCTGGGATGCTTGGCTATAATCACTTTTGTTGGTGGTAATGATCAAGAGGAAACAGAGAAATCAATGGACATACTGTGGCGAGTGATTCATCCCAGATTAGGTTCCAATGTAGTTGCAGTCAAACCTTCTGCTCCATTAATAACTGCCATCATATCTGCTTGGTCCTTTCTCCTATCTACAATGAGCGAGTTCAACCTAAATTCTAAACATTGGCAAAATTCAATATCTTATTTATCAAGTCTTTTAGACAAGGAAGATCGGCCTGTACGTATTGCTGCTGGTGAAGCACTGGCTGTAATTTTTGAGAATGGGATTATAGAGAAATTTTCTGCTGATTCTAAGGGTGCAAGTGCAATGAATCAAGAAGAGATTAACCAGCAGGAAAGTTACGTCCATTTACAAGGATTGAAAAGGAAGGTCATCAATCAAGTCAAAAACCTTTCTGTTGAGGCTGGTGGAAAAGTTTCTATGAAAATTGGTGGTGATTCACTGCAGACATCTTCATGGTCCAAAATGATACAGTTGAACTTTCTCAAGCACTTTTTAGGGGGAGGAGGATTCATCAAGCATATGCAGAGAATGTTCAAGTCTCCAAATTCAGTTCAGAACAAGGCTAGGACACAATTACTTAATAAGCAACGGTTGTTATCTGAGATTCCCGCCAAATCAGCTGCACATGATAGCCGCCTGAGCTGGACTCAGTTTGAAGGATTTGTCCATGTGCCTACGTTTGAATGTTCTGGCAACCATCATTGCTTCTTTTTTCCGAACTGCTAA 1176 0.4107 MGKRNSQRKNAAMLDSDDDSSSVSSSSTSRTDHVSVSGNEEVLFDQDALLDHALDALDEKRFATLLHLCLASIKKGAKKASAKEIALASHVIGLLSLTVGYGDNRAREIFEETARPLDEFLTSKSDLTKNPSLLGCLAIITFVGGNDQEETEKSMDILWRVIHPRLGSNVVAVKPSAPLITAIISAWSFLLSTMSEFNLNSKHWQNSISYLSSLLDKEDRPVRIAAGEALAVIFENGIIEKFSADSKGASAMNQEEINQQESYVHLQGLKRKVINQVKNLSVEAGGKVSMKIGGDSLQTSSWSKMIQLNFLKHFLGGGGFIKHMQRMFKSPNSVQNKARTQLLNKQRLLSEIPAKSAAHDSRLSWTQFEGFVHVPTFECSGNHHCFFFPNC 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02915 391 MobiDBLite consensus disorder prediction 16 36 - -
Vimu1g02915 391 Pfam Interferon-related protein conserved region 322 347 IPR006921 -
Vimu1g02915 391 Pfam Interferon-related developmental regulator (IFRD) 48 287 IPR007701 -
Vimu1g02915 391 PANTHER INTERFERON-RELATED DEVELOPMENTAL REGULATOR 48 351 IPR039777 -
Vimu1g02915 391 MobiDBLite consensus disorder prediction 1 36 - -
Vimu1g02915 391 SUPERFAMILY ARM repeat 60 238 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02915 Vimu-Chr1 41507337 41514224 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02915 1 41507337 41514224 Vimu10g03224 10 42662451 42666794 PCT