Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02906 ATGGCATCCAAGGACCCAACACTCCTCAAACTCCACTCAGCACGCTCCGACCTCAAAACCCTCCTCCAAGCCTCATCGGAGGCACAACACGACATCAAAGAAACCGAGAAAAGGTTTTCTCTCTACCAGCAATCTCTCTCAACCGCCTCCAGAAGAATAATCCCTTTGCAGTCCCTAACCATGTCCAGAAAAGCCCTTGACGCCAGGATCACCAGAGCGGTTTCCCCGGCGGTGGAACTCCTCAACACGTTCAAGCGCACGGAGGGTCTTCAGGCCAAGCTCGTCACCTTCTCGGCCGAGCTGTCGTCGGAGAAGTCGCAGCAGAGGAGGTTGGAGAAGCTGGTGGAATACGTGGCGTGCGTGGAAGAAGTGAAGGAAGGGATAGAGAACATATGCGAGGAGGTGGAGATGGTGGTTCAGAGGCTGCAGGAGGTGGTGGAGTTTGTGAGCAGGACGAAGGCTGCGGATCAGGACAGGGACATGAGGCTGAAGGATGCTTTAGTGACGCTGAAGGTGCTGTATGAGAGGGAGGTGGATGAGATGAGGTTTGAGGGGTTGTTGGATCAGGCGTTGCTCCATGTGCAGGATGAGTTTGAGGAGCTGCTGCTGAGGATGAAGCACCGGAACATGAAGGATTTGTTGCACCAGCATGGTGGCGAAGAAAGGGAACTGGGGTCGGAAATGGAGGTTGAAACCCTCAGAAGAATTTCAACCACCCTTGCTGCCAATGATTGCATGGACATTTGCATTGATATATACCTCAAGGCGAGATACAGAAGAGCTGCGAAGGCACTGATGAAGCTAAATCCCGATTACCTTCGAACATACACCCCAGAAGGAATCGACGAAATGGAGTGGGAAACCTTAGAAACAGCCATAACCCTTTGGATTCAACACTTCGAAGTGGCAGTCAAGAAGGTGCTGTTTTCAGAAAAGAAACTATGCGAGAGAGTCCTGGGCGATTTCATGGAGGGTCTAGTTTGGCCAGAATGCTTCATCAAAATCTCCGACAAGATCATGGCCGTGTTCTTCCGCTTCGGAGAAGGCGTGGCCCGAAGCAGCAAAGAGCCCCAGAAGCTCTTCAAACTATTGGATATGTTTGAATCCCTAGAAAAACTCAAACCCCATATATCACAAATCTTCGAAGGAGAACCTGGCGCAGACATATGCACGCGGTTCCGTGAGTTGGAGAAGCTCATCATCGATGCTTCAAGCAAAGTCTTCTGGGAATTCGGACTCCAAATAGAAGGCAACATCGACGGTCTCCCCCCTCCGCAAGACGGTTCCGTTCCGAAGCTGGTACGTTACGCCATCAACTACCTCAAATACCTAACCGCAGTCAATTACAAAACATCCATGATCAAGGTTCTCCGAACACAACAAACGTGGAGAGGCAAAGATGGTAGTAGTAGTATTGAAACAAATGGCAAGGAGACGTTAACGGACGAGGATTTGTTGAAGCATGCGATTTCCAACGTGATGGAGGCGCTTCAGAGGAACGTAGAGTCAAAGAGAGTGTGTTGTAGGGACAAGGTGTTGGTGCATGTGTTGACGATGAACACTTATTGGTACATATACATGAGGACGAAGAACACGCAGCTCGGTGAGGTGTTGGGTGAGAAGAGTATGAAGGAGGAATACAAGGCTGTGGCGGAGGAATGCGCTTACTTGTATCAGAAGCAAGCATGGGGGGCTTTGGTGAAGGTTTTGGATGGTGATGATGTGATGGAGGAAGGGAAGGGGAGTGTGGGAAGAGTGGTGAGTGAAAAGGTTGAGACTTTCTTCAAGGGTTTGAACGAGGTTTGTGAGAGACATGCAAGAGGGGTGTATAGTATACCTGATGTTGATTTGAGGGAGCAGATGAGAGAGGCTACAGTGAGGCTTGTGGTGCCTGCATATGCAGAGTTTTTGGAATGTTATTCAGAGTTTTTGAATAAGAAAGGGTATCCCAGTGTTGAGAGGGTGAAAGGGTTGGTGGTGAAGGCTTTTGATGGAGGAAGGTTGAGGAGGAAGGGTTCTACTTCTGGGTCTTTGGAGAGGGATATTGTTGTAAGGGATGTTTGA 2064 0.4961 MASKDPTLLKLHSARSDLKTLLQASSEAQHDIKETEKRFSLYQQSLSTASRRIIPLQSLTMSRKALDARITRAVSPAVELLNTFKRTEGLQAKLVTFSAELSSEKSQQRRLEKLVEYVACVEEVKEGIENICEEVEMVVQRLQEVVEFVSRTKAADQDRDMRLKDALVTLKVLYEREVDEMRFEGLLDQALLHVQDEFEELLLRMKHRNMKDLLHQHGGEERELGSEMEVETLRRISTTLAANDCMDICIDIYLKARYRRAAKALMKLNPDYLRTYTPEGIDEMEWETLETAITLWIQHFEVAVKKVLFSEKKLCERVLGDFMEGLVWPECFIKISDKIMAVFFRFGEGVARSSKEPQKLFKLLDMFESLEKLKPHISQIFEGEPGADICTRFRELEKLIIDASSKVFWEFGLQIEGNIDGLPPPQDGSVPKLVRYAINYLKYLTAVNYKTSMIKVLRTQQTWRGKDGSSSIETNGKETLTDEDLLKHAISNVMEALQRNVESKRVCCRDKVLVHVLTMNTYWYIYMRTKNTQLGEVLGEKSMKEEYKAVAEECAYLYQKQAWGALVKVLDGDDVMEEGKGSVGRVVSEKVETFFKGLNEVCERHARGVYSIPDVDLREQMREATVRLVVPAYAEFLECYSEFLNKKGYPSVERVKGLVVKAFDGGRLRRKGSTSGSLERDIVVRDV 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02906 687 PANTHER EXOCYST COMPLEX PROTEIN EXO70 132 663 IPR004140 GO:0000145|GO:0006887
Vimu1g02906 687 Pfam Exo70 exocyst complex subunit 296 646 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vimu1g02906 687 SUPERFAMILY Cullin repeat-like 162 647 IPR016159 -
Vimu1g02906 687 Coils Coil 18 38 - -
Vimu1g02906 687 Gene3D Exocyst complex component Exo70 162 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02906 Vimu-Chr1 41466503 41468696 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02906 5 651 EXO70 exocyst subunit family AT4G31540 28.722 3.96e-75 253
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02906 1 41466503 41468696 Vimu1g02906 1 41466503 41468696 ECH