Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01153 ATGGGAAAGTCAACGGCGTGTTTGTTTGGTGCCATTGTGATCCTTTGGTGCTGCATAAGCCATGTCACATCGGATGCATCGGATCACCGTTACAACAAAGGAGATTCCGTTCCCTTTTATGCCAACAAGGTGGGACCCTTTCACAATCCCAGTGAGACATACAGATATTTTGATCTTCCCTTTTGCTCACCAGATAAAGTGAAAGAAAAGAAGGAAGATCTTGGTGAAGTTTTGAACGGGGATCGATTAGTTGTTGCTCCTTACGAACTGGACTTCCAGATTGACAGGGAACCTCAAAGTATCTGCAAAAAGAGGCTTACAGTAAACGAGGTGGCTAAATTCAGACATGCTGTCTTGAAGGACTATTTTTACCAAATGTACTATGATGACTTGCCCATTTGGGGTTTCCTAGGAAAATTTGACAGTGAAGACAAGGATGATCCAACTGGGGCCAGAGTCCATCTTTTCAAGCATGTCCACTTTGAGATTCTGTACAATAAGGATCGCATCATTGATGTTTTCATTCGAAACGATCCACGTGCCGTTGTGGACCTGACACAAAATAGGGAAGTTAATGTGGATTTCACATATTCTGCCAAATGGATTGAAACAGATACTCCATTTGAGAAGAGGCTGGAGAAATACTCACAAACATCCTCACTGTCACATAACTTGGAAATCCATTGGTTTTCTGTCATCAACTCATGTGTGACTGTTCTGCTCTTGACTGGATTCCTGGCCATAATTCTCATGCGTGTGCTCAAGAATGATTTTGTTAAGTTTACTCCTGATGAGGAAGCAGTTGATGATCAGGAAGAAAGTGGATGGAAGTATATCCATGGTGATGTGTTCAGCCGCACTTGGAACAGGAACCCAGCTATTTACACTGTGAGTTGCCAGCTTAAGTACTTATCTTTTAAAGGTGTTGACTTTGTATTGTTCAGCGCTTTCCTGACCGTGATATTTGATCCTGCTTTCAGTGCAATATTCATCTTTATGCTTGCTCTAGTTGGTGTTTTCTATCCATACAATAGGGGATCTTTGTTTACTGCACTGGTGATCATATATGCACTAACTTCCGGCATTGCGGGCTACTACGCAGCTTCCTTTTATTACATGGTTGAAGGCAAAAACTGGGTGAAAATTTTGGTGTTGACTGGAAGTTTGTTCTCTGGACCTTTGTTTTTCACATTCTGCTTTCTTAATACTGTTGCACTTGCCTATAACACCACTGCAGCGCTTCCATTTGGAACAATTGTGGTTATTTTCCTCATATGGACTCTTGTAACCTCACCTTTACTAGTACTGGGAGGGATTGCAGGCAAGAATAGCCAAACAGGGTTTCAAGCTCCTTGCCGTACCAATAAATATCCTAGGGAAATTCCCCAACTACCTTGGTACCGTACAACTCTATCTCAAATGGCTATGGCAGGTTTTTTGCCGTTCAGTGCCATTTACATTGAACTCTACTACATATTTGCCAGTGTGTGGGGTCACCAAATTTACACCATATACAGTATTTTGTTTATTGTTTTCATCATCCTATTGATTGTCACCGCTTTTGTCACTGTGGCATTGACATACTTTCAGCTTGCTACTGAGGACCATGAATGGTGGTGGAGGTCTTTCCTTTGTGGTGGGTCAACTGGCTTGTTCATCTATGGTTACTGCTTGTATTACTATTTTGCAAGATCAGATATGTCTGGCTTCATGCAAACCTCTTTCTTTTTTGGCTACATGGCTTGTATTTGCTATGGTTTCTTTCTCATGCTTGGAACTGTGGGTTTCCGTGCTGCTTTGATCTTTGTCCGTCACATATATCATTCTATCAAATGTGAATAA 1842 0.4159 MGKSTACLFGAIVILWCCISHVTSDASDHRYNKGDSVPFYANKVGPFHNPSETYRYFDLPFCSPDKVKEKKEDLGEVLNGDRLVVAPYELDFQIDREPQSICKKRLTVNEVAKFRHAVLKDYFYQMYYDDLPIWGFLGKFDSEDKDDPTGARVHLFKHVHFEILYNKDRIIDVFIRNDPRAVVDLTQNREVNVDFTYSAKWIETDTPFEKRLEKYSQTSSLSHNLEIHWFSVINSCVTVLLLTGFLAIILMRVLKNDFVKFTPDEEAVDDQEESGWKYIHGDVFSRTWNRNPAIYTVSCQLKYLSFKGVDFVLFSAFLTVIFDPAFSAIFIFMLALVGVFYPYNRGSLFTALVIIYALTSGIAGYYAASFYYMVEGKNWVKILVLTGSLFSGPLFFTFCFLNTVALAYNTTAALPFGTIVVIFLIWTLVTSPLLVLGGIAGKNSQTGFQAPCRTNKYPREIPQLPWYRTTLSQMAMAGFLPFSAIYIELYYIFASVWGHQIYTIYSILFIVFIILLIVTAFVTVALTYFQLATEDHEWWWRSFLCGGSTGLFIYGYCLYYYFARSDMSGFMQTSFFFGYMACICYGFFLMLGTVGFRAALIFVRHIYHSIKCE 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01153 613 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 23 613 IPR004240 GO:0016020
Vimu1g01153 613 Pfam Endomembrane protein 70 53 570 IPR004240 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01153 Vimu-Chr1 8866505 8869639 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g01153 22 613 Miscellaneous Gene Families AT2G01970 73.649 0.0 888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01153 1 8866505 8869639 Vimu1g01153 1 8866505 8869639 ECH